DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment feo and prc1a

DIOPT Version :9

Sequence 1:NP_572658.2 Gene:feo / 32015 FlyBaseID:FBgn0030241 Length:671 Species:Drosophila melanogaster
Sequence 2:XP_021326115.1 Gene:prc1a / 259194 ZFINID:ZDB-GENE-020801-3 Length:612 Species:Danio rerio


Alignment Length:681 Identity:164/681 - (24%)
Similarity:288/681 - (42%) Gaps:128/681 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 AQILEMTGEHVDQLHAMWSQLFEVKTCGEFLLRLKD----HANSFFTDLLNESREKQQAILNDIA 71
            |:.:....:.::||..:|.   |:....:..|:..|    |..:....::.|....::.:|..|.
Zfish     9 AESVSSLNKALNQLKDIWE---EIGIPEDQRLQRTDAVHMHIKNLLDMMIAEEEGLKKRLLTSIE 70

  Fly    72 ALRAEATDLTRLLHEPLDIGERPESMPLVVWELKLDKSIEHLRDQL-------ARRRAEICELLL 129
            |.|.|.:.|.    :.|.:.|..|...|.:.:|:.|     ||.|:       :.|:.|:..|:.
Zfish    71 ACRNEVSSLC----DELQLQEFQEEDGLTMLQLEKD-----LRTQVKLMLKEKSSRQTELKSLIQ 126

  Fly   130 QQEQLCEELGELPLPLLADPLPLPEEMDAFRNRLGQLRDQRVLRLKEMDQLRQAIKHDMKLLECL 194
            |.:.||:.|.|...|:..:.:|..:::..:|..:.....::..|..|..::::.|...|:.||..
Zfish   127 QDQDLCDVLCEDLFPIHPERVPSQQQLQNYRQHINTRNQEKERRHAEFVEMKRQITVLMEDLEQS 191

  Fly   195 PQTDTEERLL--NQVDHCLTPETFELLRNMQKNFADQVKELRERIDDMREKIHVLWDRLQETDEY 257
            |.|..|:..:  ::...||:.|....|:.:.:....:..|.......::.:|..||:.|:...|.
Zfish   192 PDTTFEKDAVCEDEDAFCLSVENISSLKVLLRQLETRKAESEALSVSIQARIEELWEMLEIPLEE 256

  Fly   258 AMRRVREATTYTQRTYDVLREELQRCQALRRQNLKTFIEQLRIEIKEMWDLTLKSQQERKRFSNY 322
            ....:....:.|:...:.|:.|.||.:.|:::|::..|..:|.||.:.|:....||::|:.|..:
Zfish   257 RDGLMLHTHSSTKSRLNALQAEFQRMEGLKKKNIERVIRTIRSEIVKFWEKCYFSQEQRRAFLPF 321

  Fly   323 YNDWYNEDLLELHELELDDLKTFYNKNKEIFDLYESRAELWSRMEALEAKASEPNRFNNRGGQLL 387
            ::|..::|||..||.||:.||..|.:.||::|...:.:..|:..:.||.||::|:|||||||.||
Zfish   322 HSDDLDDDLLREHEQELERLKQNYTEYKELYDAVSTWSSNWTLYQELEKKATDPSRFNNRGGNLL 386

  Fly   388 KEEKERKAITSKLPKIEQQITELVQAYEAQENTPFLVHGENILERMAADWERHRQAKQ---QSSA 449
            ||||:|..:...|||:|:.:...:..:||.:...|.|:|:..|:.:...|..||..|:   |...
Zfish   387 KEEKQRVDLQKSLPKLEKSLKAQIDQWEAAQCKEFRVNGQQFLQYVEEQWSHHRMQKEMEKQERQ 451

  Fly   450 RKK--------------APPSASKIMPPPATGSTAPRTPRTLRNMSTLSSST--MSLRKTPSQQH 498
            .||              ..|:..:|...|..|.|     |.|.:.|::.|||  .:||...|...
Zfish   452 MKKIKQTEEDLLYGTVIRTPTKRRIAGTPTPGKT-----RKLTSASSMCSSTPNTTLRSICSSPS 511

  Fly   499 LRPLNITKSTGNLHKRL-----NPSGLQTGPKTPNAKRSLMNTLNSMKASPAKHLLAPSQQHNQL 558
            :||   ..|:..|:.|.     .|.||:...:..:   .|...|.:|.|||          |:..
Zfish   512 MRP---PLSSSKLNARTPARGRTPRGLERNKENLS---HLSGALRTMTASP----------HSNY 560

  Fly   559 KSTKSPLKRVRVLDNTLRRSGGMGRRSIGTRSSKKARTKSNDQNAPPDSSDYTTDENPEQGVSYD 623
            ..|                       |:.:                                ||.
Zfish   561 SIT-----------------------SVAS--------------------------------SYS 570

  Fly   624 EFQPTSRSSMLPRQ---RHQLAVPRTRRAEM 651
            ||...|.|:...|.   :|||:...||.:.:
Zfish   571 EFAKDSESTAASRSVWLKHQLSDTNTRSSRL 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
feoNP_572658.2 MAP65_ASE1 39..613 CDD:281928 147/610 (24%)
prc1aXP_021326115.1 MAP65_ASE1 37..578 CDD:309213 152/625 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 188 1.000 Domainoid score I3240
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H133826
Inparanoid 1 1.050 188 1.000 Inparanoid score I3891
OMA 1 1.010 - - QHG55705
OrthoDB 1 1.010 - - D272248at2759
OrthoFinder 1 1.000 - - FOG0001893
OrthoInspector 1 1.000 - - mtm6397
orthoMCL 1 0.900 - - OOG6_103576
Panther 1 1.100 - - O PTHR19321
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X857
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.980

Return to query results.
Submit another query.