DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment feo and mcp1

DIOPT Version :9

Sequence 1:NP_572658.2 Gene:feo / 32015 FlyBaseID:FBgn0030241 Length:671 Species:Drosophila melanogaster
Sequence 2:NP_593128.1 Gene:mcp1 / 2542755 PomBaseID:SPAC1687.10 Length:661 Species:Schizosaccharomyces pombe


Alignment Length:682 Identity:143/682 - (20%)
Similarity:252/682 - (36%) Gaps:209/682 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 NSFFTDLLNESREKQQAILNDIAALRAEATDLTRLLHEPLDIGERPESMP---------LVVW-- 102
            |:...|.|:..:.|.:..:.:|.:...|.:....||.:.|.|.|..| :|         ||.:  
pombe    34 NNIILDALSGHQRKLEIKIINIESKCNELSSEISLLRKRLGIIEEIE-IPRTLIDQYECLVTYHN 97

  Fly   103 -----------ELK-LDKSIEHLRDQLARRRAE----------ICELLLQQEQLCEELGELPLPL 145
                       |.| :.|.||.|...|.....|          |.::.|  |||..:|.||    
pombe    98 GIRAIYNTKKNEAKNMYKEIERLSVILGESVDEVNFVNGDFEDISDIKL--EQLSAKLNEL---- 156

  Fly   146 LADPLPLPEEMDAFRNRLGQLRDQRVLRLKEMDQLRQAIKHDMKLLECLPQTDTEERLLNQVDHC 210
                           :::.:||.::.:.:||  :|:: ::..:.:...:|..|..:   |.:.|.
pombe   157 ---------------HQIYRLRKEKNIEIKE--ELKK-LQDSLSIKLSMPADDLSK---NGIKHL 200

  Fly   211 LTPETFELLRNMQKNFADQVKELRERIDDMREKIHVLWDRLQETDEYAMRRVREATTYTQRTYDV 275
            :..:  |.||...::...:|.|:...:.:|..|        ..|.|.       .|.|:.:|..:
pombe   201 IIYK--EKLRFSLESRKSRVDEIVNEMKNMCGK--------NPTSEL-------PTNYSDKTLTL 248

  Fly   276 LREELQRCQALRRQNLKT---FIEQLRIEIKEMWDLTLKSQQERKRFSNYYNDWYNEDLLELHEL 337
            ...||...:.:.....||   |:::..:.:..:..::.|......:|....|  .|.:|::..:.
pombe   249 WENELSSMRKVYFVKYKTEYEFLQKRYLSLARIMFVSKKEMLFTSQFKEIPN--VNRELIQSMKQ 311

  Fly   338 ELDDLKTFYNKNKEI------FDLYESRAELWS-RMEALEAKASEPNRFN--NRGGQLLK----- 388
            |:.:|:...:...|:      :.|.|||....| ||:.|...||:|....  .:..||||     
pombe   312 EIGNLEVDLHLQGELNNMIRRYLLLESRVYKESQRMKVLSGSASQPFTLKRLQKDFQLLKAKLIC 376

  Fly   389 ------EEKER------KAITSKLPKIEQQITELVQAYEAQENTPFLVHGENILERMAADWERHR 441
                  |:.|:      |.::|:|..|              .:.|.|.:.|||            
pombe   377 ALREWEEDNEKKIYVFGKPLSSRLLMI--------------HSPPILQNQENI------------ 415

  Fly   442 QAKQQSSARKKAPPSASKIMPPPATGSTAPRTPRTLRNMSTLSSSTM--SLRKTPSQQHLRPL-- 502
                .|:...|:.|.:|    |||..:|.....:.|||:...|..::  .||..   .|..||  
pombe   416 ----SSNDNSKSSPESS----PPARKTTGKIENKKLRNIDVQSKKSIRFPLRLA---SHEEPLID 469

  Fly   503 ----------NITK--------STGNLHKR------LNP--SGLQTGPK----TPNAKRSLMNTL 537
                      :::|        |:|.|.|.      |:|  .|.:.||:    :|:|..|     
pombe   470 RMVNQSPDTRSVSKSKRLVRETSSGCLFKNHSKSNTLSPRRKGSRHGPREPCLSPDASSS----- 529

  Fly   538 NSMKASPAKHLLAPSQQ---HNQLK-----STKSPLKRVRVLDNTLRRSGGMGRRSIGTRSSKKA 594
             |:..:..|.:| |||.   ||.:|     :|.:.:...::::..|.|:...|.   .|.|....
pombe   530 -SIPVTDIKEIL-PSQHDTPHNSVKLTGSSTTPASVSLRQMIEPLLSRTPPKGE---FTNSLDDT 589

  Fly   595 RTKSN-----------DQNAPPDSSDYTTDEN 615
            .|:||           |.....:||..:.|::
pombe   590 PTQSNVEKVDRFLENHDWETCSESSSASEDQS 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
feoNP_572658.2 MAP65_ASE1 39..613 CDD:281928 142/678 (21%)
mcp1NP_593128.1 PRK03918 <2..>234 CDD:235175 47/237 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4302
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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