DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment feo and spd-1

DIOPT Version :9

Sequence 1:NP_572658.2 Gene:feo / 32015 FlyBaseID:FBgn0030241 Length:671 Species:Drosophila melanogaster
Sequence 2:NP_490809.2 Gene:spd-1 / 171683 WormBaseID:WBGene00004952 Length:529 Species:Caenorhabditis elegans


Alignment Length:593 Identity:121/593 - (20%)
Similarity:233/593 - (39%) Gaps:142/593 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 QLHAMWSQLFEVKTCGEFLLRLKDHANSFFTDLLNESREKQQAILNDI-AALRAEATDLTRL-LH 85
            :|.|:|.   ||.......|:..|:|.:..|.|.::....::.::::: .::|.:..::.:: |.
 Worm    24 ELSALWD---EVDMSEAMRLKRVDNAFTHITLLCDDMLSGEKEMIHNLKVSIREDMQNVKKMRLE 85

  Fly    86 EPLDIGERPESMPLVVWELKLDKSI---EHLRDQLARRRAEICELLLQQEQLCEELGELPLPLLA 147
            ..::..:||.       |:| |.||   .||:.::.....|.......|..|.|::..|...|.:
 Worm    86 LEMEDFQRPA-------EIK-DGSIALMRHLQSEVKSLETEFQTRHEDQRVLIEKICNLKKRLES 142

  Fly   148 D-----------PLPLPEEMDAFRNRLGQLRDQRVLRLKEMDQLRQAIKHDMKLLECLPQTDTEE 201
            |           |:...|:..|              ...||::|   :||....:|.| |||..:
 Worm   143 DFEFEYEIHALFPVKAFEKYSA--------------SCSEMEEL---LKHRYHQIERL-QTDISQ 189

  Fly   202 RLLNQVDHCLTPETFELLRNMQKNFADQV------KELRERIDDMREKIHVLWDRLQETDEYAMR 260
                             .::|.:|.||.:      |.|.|:..|..|.:                
 Worm   190 -----------------WKSMAQNVADYIGGDDDLKNLLEKNIDSPEFV---------------- 221

  Fly   261 RVREATTYTQRTYDVLREELQRCQALRRQNLKTFIEQLRI-------EIKEMWDLTLKSQQERKR 318
                   :::|..|.|:......:.|    .|.::|.:..       :::|:|:..|.|:.:| .
 Worm   222 -------FSERLLDSLQSYHSELEPL----YKHWLEDIEFRWTEKHQQLQELWEKCLVSEADR-H 274

  Fly   319 FSNYYNDWYN-EDLLELHELELDDLKTFYNKNKEIFDLYESRAELWSRMEALEAKASEPNRFNNR 382
            :|..:....| |..|:..|.|.|.|:..|...:.:|:|.:....:|:....::.|..:||.:...
 Worm   275 YSPIFEPTKNSEQTLKRMEDECDRLEKKYEACRIVFELVDKWRAVWTEKLTIDEKRKQPNYYKTT 339

  Fly   383 GGQLLKEEKERKAITSKLPKIEQQITELVQAY-EAQENTPFLVHGENILERMAADWERHR----- 441
              .:|.:.|..:.:.:::|.:|::|....:.| ...:.....:.|...||.:....|.|:     
 Worm   340 --NVLPDNKRERELLNQMPVLERKIDSAHRKYGNEHDGEQISIQGMAPLEYVRFVQEEHKRELKF 402

  Fly   442 --QAKQQSSARKKAPPSASKIMPPPATGSTAPRTPRTLRN------MSTLSSSTMSLRKTPSQQH 498
              |.|::...|.::|              |..|||||.:.      |||.....:: :|......
 Worm   403 ELQLKKEEKTRMQSP--------------TPTRTPRTQKRAMFRTPMSTAKMEPVA-KKLNFDTD 452

  Fly   499 LRPLNITKSTGNLHKRLNPSGLQ-TGPKTPNAKRSLMNTLNSMKASP--AKHLLAPSQQHNQLKS 560
            |.|. ::.:|..:...:.|:..| .||||.:.|.:..:|.:|.:.:.  :|..:.||   :...|
 Worm   453 LPPC-MSPATSEMISFITPTRRQAVGPKTSSPKDTQPSTSSSSRTTTPMSKRAMTPS---SIASS 513

  Fly   561 TKSPLKRV 568
            |.|..|:|
 Worm   514 TPSSAKKV 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
feoNP_572658.2 MAP65_ASE1 39..613 CDD:281928 116/577 (20%)
spd-1NP_490809.2 MAP65_ASE1 <228..472 CDD:281928 54/266 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5674
OMA 1 1.010 - - QHG55705
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001893
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19321
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3175
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.090

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