DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment feo and prc1.2

DIOPT Version :9

Sequence 1:NP_572658.2 Gene:feo / 32015 FlyBaseID:FBgn0030241 Length:671 Species:Drosophila melanogaster
Sequence 2:XP_012823157.2 Gene:prc1.2 / 100125796 XenbaseID:XB-GENE-1020943 Length:581 Species:Xenopus tropicalis


Alignment Length:600 Identity:160/600 - (26%)
Similarity:260/600 - (43%) Gaps:106/600 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 AQILEMTGEHVDQLHAMWSQLFEVKTCGEFLLR----LKDHANSFFTDLLNESREKQQAILNDIA 71
            |.::......:.:|..:|..| .:|.  |..||    :|.|.......:::|..:.:..|...|.
 Frog    13 ASLISSMNHALARLMDIWDGL-GIKE--EMRLRRMEEVKKHIEELLNRMISEEVDMKDRIEKSIQ 74

  Fly    72 ALRAEATDLTRLLHEPLDIGER--PESMPLVVWELKLDKSIEHLRDQLARRRAEICELLLQQE-- 132
            ..:.|   |..|.|| |.|.|.  .|.|.::..|..|...:|.|.::...|..|:  .||||.  
 Frog    75 NCQKE---LKLLCHE-LSIEEYVVDEGMTVLQTERDLRVRLEMLLNEKNDRLEEL--RLLQQTDI 133

  Fly   133 QLCEELGELPLPLLADPLPLPEEMDAFRNRLGQLRDQRVLRLKEMDQLRQAIKHDMKLLECLPQT 197
            :||.:|...|..:....:|..::::..:..:....:::..||:....||..|:      :||.:.
 Frog   134 ELCTDLCVTPYYIPTGSIPSRQQLEELKEHIKVQTEEKKQRLQVFSTLRAEIR------QCLDEM 192

  Fly   198 DTE-ERLLNQVDHCLTPETFELLRNMQKNFADQVKELR--------------ERIDDMREKIHVL 247
            ..: |..|.|...|...|.|.|.       ||.:|.||              ..:..::|::.||
 Frog   193 GRQPENSLEQDAICEDEEAFFLT-------ADNIKALRVLKEQLELKKETMLSTLSALKERVQVL 250

  Fly   248 WDRL------QETDEYAMRRVREATTYTQRTYDVLREELQRCQALRRQNLKTFIEQLRIEIKEMW 306
            |.||      |||.:      :........:..:...||.|.:.|::.|||..:.::|.|:|..|
 Frog   251 WSRLLVPQDEQETCQ------KSPLCPIANSIKLWENELIRLEDLKKANLKDVVLKIREELKMYW 309

  Fly   307 DLTLKSQQERKRFSNYYNDWYNEDLLELHELELDDLKTFYNKNKEIFDLYESRAELWSRMEALEA 371
            |....|.::||.|:.||||.:.|:||..|:.|:..::..|.|.:|:.|........|.:...||.
 Frog   310 DKCFYSTEQRKSFTPYYNDDFTEELLSQHDEEVVRMRLQYEKCREMLDAVNKWETSWGQFVLLEK 374

  Fly   372 KASEPNRFNNRGGQLLKEEKERKAITSKLPKIEQQITELVQAYEAQENTPFLVHGENILERMAAD 436
            ||::||||:||||.||||||||..:...|.|:|:::...::|:|.::...||:.|...::.:.:.
 Frog   375 KATDPNRFSNRGGSLLKEEKERAKLQKMLSKLEEELKSRIEAWETEQGCAFLLKGHRFMDYITSQ 439

  Fly   437 WERHR----QAKQQSSARK------KAP---PSASKIMPPPA---------TGSTAPRTPRTLRN 479
            ||.|:    :.||..|.:|      |.|   |:.|.|...|:         :.|...||  |:.|
 Frog   440 WEMHKKQKEREKQDRSLKKEEHTPFKTPIKRPAGSCIQGTPSNKTRKLNGTSNSAMSRT--TVSN 502

  Fly   480 MSTLSSST---------MSLRKTPSQQHLRPLNITKSTGNLHKRLNPSGLQTGP----------- 524
            .||.||::         :|..|||.:....|:.......|    ...|||.:.|           
 Frog   503 SSTASSTSSQSLNGKMPLSTIKTPMKNRDTPVRTPLQDSN----KQTSGLSSQPGSYSEFKEEMT 563

  Fly   525 -KTPNAKRSLMNTLN 538
             |:.|......:|:|
 Frog   564 KKSSNTDAIFNSTVN 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
feoNP_572658.2 MAP65_ASE1 39..613 CDD:281928 154/571 (27%)
prc1.2XP_012823157.2 MAP65_ASE1 41..496 CDD:397896 132/479 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 206 1.000 Domainoid score I2835
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 206 1.000 Inparanoid score I3615
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D272248at2759
OrthoFinder 1 1.000 - - FOG0001893
OrthoInspector 1 1.000 - - mtm9438
Panther 1 1.100 - - O PTHR19321
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3175
SonicParanoid 1 1.000 - - X857
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.190

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