DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sp8 and Spps

DIOPT Version :10

Sequence 1:NP_001366308.1 Gene:Sp8 / 320145 MGIID:2443471 Length:504 Species:Mus musculus
Sequence 2:NP_001262902.1 Gene:Spps / 42882 FlyBaseID:FBgn0039169 Length:985 Species:Drosophila melanogaster


Alignment Length:286 Identity:115/286 - (40%)
Similarity:135/286 - (47%) Gaps:90/286 - (31%)


- Green bases have known domain annotations that are detailed below.


Mouse   241 PNGAAA---LPGSLHPAAGGLQTSLHS-------PLGG----YNSDYSGLSHSAFSSGAS-SHLL 290
            ||..|.   :|.|| ||...:.....|       |.||    ..:...|.:.|..|:..| :.:.
  Fly   618 PNTPATTQPIPVSL-PARSKVNAVTTSSTQITIAPTGGQVVSVTTQARGATASIRSTNTSTTTIT 681

Mouse   291 SPAGQHLMDGFKPVLPGSYPDSAPSPLAGAGSSMLSAGPAAQLG------GSPRSSARRYSGRAT 349
            :|:..||                     ....|:.|.|.||..|      |.|:...:    |..
  Fly   682 TPSQSHL---------------------NMNISVASVGGAATGGGGGTATGEPKPRLK----RVA 721

Mouse   350 CDCPNCQEAERLGPAGASLRRKGLHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKR 414
            |.||||.:.|:...      :|..|.|||.||.|||||||||:||||||||||||||:|.|||||
  Fly   722 CTCPNCTDGEKHSD------KKRQHICHITGCHKVYGKTSHLRAHLRWHTGERPFVCSWAFCGKR 780

Mouse   415 FTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKHVKTH----SG----------------- 458
            ||||||||||.|||||||||.|..|||:||||||||||:|||    ||                 
  Fly   781 FTRSDELQRHRRTHTGEKRFQCQECNKKFMRSDHLSKHIKTHFKSRSGVELIELSIKQETKGGNA 845

Mouse   459 ----------------GGGSAGSGGG 468
                            |||||.:|.|
  Fly   846 PKSISTVNGIVTIEIPGGGSAAAGSG 871

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp8NP_001366308.1 SP8_N 19..375 CDD:411690 35/154 (23%)
C2H2 Zn finger 379..398 CDD:275368 15/18 (83%)
zf-H2C2_2 390..417 CDD:463886 23/26 (88%)
C2H2 Zn finger 406..428 CDD:275368 18/21 (86%)
zf-H2C2_2 420..443 CDD:463886 18/22 (82%)
zf-C2H2 434..456 CDD:395048 16/21 (76%)
C2H2 Zn finger 436..456 CDD:275368 15/19 (79%)
SppsNP_001262902.1 SP1-4_N <281..>371 CDD:425404
Atrophin-1 284..>630 CDD:460830 4/11 (36%)
SP1-4_N <713..741 CDD:425404 9/37 (24%)
C2H2 Zn finger 742..764 CDD:275368 18/21 (86%)
zf-H2C2_2 756..783 CDD:463886 23/26 (88%)
C2H2 Zn finger 772..794 CDD:275368 18/21 (86%)
zf-H2C2_2 786..809 CDD:463886 18/22 (82%)
zf-C2H2 800..822 CDD:395048 16/21 (76%)
C2H2 Zn finger 802..822 CDD:275368 15/19 (79%)
Blue background indicates that the domain is not in the aligned region.

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