DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sp8 and luna

DIOPT Version :10

Sequence 1:NP_001366308.1 Gene:Sp8 / 320145 MGIID:2443471 Length:504 Species:Mus musculus
Sequence 2:NP_995811.1 Gene:luna / 2768719 FlyBaseID:FBgn0040765 Length:570 Species:Drosophila melanogaster


Alignment Length:210 Identity:45/210 - (21%)
Similarity:68/210 - (32%) Gaps:74/210 - (35%)


- Green bases have known domain annotations that are detailed below.


Mouse   145 PPIYKNERQTGAPHSKQDLIIVSSKFPAAQPPDPSLPSKIETEYWPCPP-SLATM--EIEWRRKA 206
            ||.     .||.|:...|:.::......|:|.:   ..:|..:. |.|| ::||:  ..|..||.
  Fly   441 PPF-----TTGLPYCGYDIYVLDKNGHEAKPNE---LGRIVVKL-PLPPGNMATLYRSDELFRKT 496

Mouse   207 AEQGKP--------------------MEDDD-------------FEDL------TEDAKRLQEQE 232
            ..|..|                    ..|||             .||.      ..||......|
  Fly   497 YFQRFPGYYDTMDAGYKDENGYIYVTARDDDVINVAGHRISTSSLEDAILRHPDVADAAVFGVPE 561

Mouse   233 LQKIQ---------SNLGKLILKEEIEKSGLIRRKTRSLPDGTNIHLGSSASTTKSASLP--PCS 286
            ..|.|         :|:.|...|..:|...:||..           :|..|:...:|.:.  |.:
  Fly   562 PTKGQIPLCLYVTKANVSKPAAKMSVELINIIREV-----------IGPIAAFKLAAQVQSLPRT 615

Mouse   287 RTGLT-RLQSADFSS 300
            |:|.| |...||.::
  Fly   616 RSGKTLRKAMADLAA 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp8NP_001366308.1 SP8_N 19..375 CDD:411690 45/210 (21%)
C2H2 Zn finger 379..398 CDD:275368
zf-H2C2_2 390..417 CDD:463886
C2H2 Zn finger 406..428 CDD:275368
zf-H2C2_2 420..443 CDD:463886
zf-C2H2 434..456 CDD:395048
C2H2 Zn finger 436..456 CDD:275368
lunaNP_995811.1 KLF6_7_N-like 2..>82 CDD:409246
COG5048 <455..>559 CDD:227381 20/107 (19%)
C2H2 Zn finger 489..511 CDD:275368 5/21 (24%)
C2H2 Zn finger 519..541 CDD:275368 3/21 (14%)
zf-H2C2_2 533..558 CDD:463886 4/24 (17%)
C2H2 Zn finger 549..569 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.