DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2202 and nom

DIOPT Version :9

Sequence 1:NP_572657.2 Gene:CG2202 / 32014 FlyBaseID:FBgn0030240 Length:889 Species:Drosophila melanogaster
Sequence 2:NP_001262384.1 Gene:nom / 41038 FlyBaseID:FBgn0037617 Length:370 Species:Drosophila melanogaster


Alignment Length:306 Identity:81/306 - (26%)
Similarity:117/306 - (38%) Gaps:68/306 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   470 PN-PDNRCEVCQ------RTFSRHCHLLRHKLSHL----------EKKPH-NCPHCPKAFAR--- 513
            || ||..|..||      ..|.|.|.|.:.|...|          |||.. |.|...|...:   
  Fly    45 PNAPDMVCFCCQTDLQSAMIFRRQCILQQKKWVPLLQSDKVGASEEKKVEPNDPSTKKKTTKRRR 109

  Fly   514 -SDHLKAHVQSLHSNKEHKCSLCEAA-----------FSRLDALER----HKVSKHNGEGLEPGS 562
             ...:...:..:....|.|.|..|:.           .:..||.:.    .::...:.:|||...
  Fly   110 GRPRMPLEIVDIVVTNESKASAGESVGGDEFDQPVEISNEPDATDSDVNLEEIDLPDEDGLESDH 174

  Fly   563 EL-KLQLAEHTCEYCSKRFSSKTYLRKHTLLHTDFL-YACKTCDETFRERAQLREHEKTHTGQRN 625
            :| .:|:  |.|:.|....::|:.|.:|...|.... |.||.|.:||...::|:.|..||     
  Fly   175 DLPNVQI--HKCDTCGIIKNNKSSLVRHQFEHNGIRPYPCKECPKTFLVASELKAHNLTH----- 232

  Fly   626 FLCCICGDSFARNDYLRVHMRRHNGEKPYKCRFCVKAFPRATDLKVHERYHTGTKPNLCNTCGKS 690
                                  |..|.|:.||:|.:.:......|.|||.||..:|.:|:.|||:
  Fly   233 ----------------------HTLEPPFACRYCDRRYFSVVGRKKHERVHTNERPFVCDQCGKA 275

  Fly   691 FHRAYNLTIHMRTHTGERPYKCDQCPKSFTQSNDLKAHIRRHTGER 736
            |.|...|..||..|...|.|.||.|.:||:....|..|...:|.:|
  Fly   276 FTRTCILKAHMAVHQVVRKYSCDVCDRSFSLKKHLATHFISNTHKR 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2202NP_572657.2 zf-AD 45..121 CDD:285071
C2H2 Zn finger 150..171 CDD:275368
C2H2 Zn finger 192..213 CDD:275370
C2H2 Zn finger 221..239 CDD:275370
COG5048 <443..730 CDD:227381 79/298 (27%)
C2H2 Zn finger 476..496 CDD:275368 8/25 (32%)
zf-H2C2_2 488..513 CDD:290200 9/35 (26%)
C2H2 Zn finger 504..525 CDD:275368 2/24 (8%)
C2H2 Zn finger 532..548 CDD:275368 4/30 (13%)
C2H2 Zn finger 573..593 CDD:275368 5/19 (26%)
C2H2 Zn finger 600..620 CDD:275368 7/19 (37%)
zf-H2C2_2 613..637 CDD:290200 4/23 (17%)
C2H2 Zn finger 628..648 CDD:275368 0/19 (0%)
zf-H2C2_2 640..663 CDD:290200 6/22 (27%)
C2H2 Zn finger 656..676 CDD:275368 7/19 (37%)
C2H2 Zn finger 684..704 CDD:275368 9/19 (47%)
zf-C2H2 684..704 CDD:278523 9/19 (47%)
zf-H2C2_2 696..721 CDD:290200 11/24 (46%)
C2H2 Zn finger 712..732 CDD:275368 7/19 (37%)
C2H2 Zn finger 739..755 CDD:275368
nomNP_001262384.1 zf-AD 5..76 CDD:214871 11/30 (37%)
C2H2 Zn finger 184..204 CDD:275368 5/19 (26%)
C2H2 Zn finger 212..261 CDD:275368 19/75 (25%)
zf-H2C2_2 255..278 CDD:290200 12/22 (55%)
C2H2 Zn finger 269..289 CDD:275368 9/19 (47%)
zf-H2C2_2 282..305 CDD:290200 10/22 (45%)
C2H2 Zn finger 297..313 CDD:275368 6/15 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24388
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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