DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2202 and Meics

DIOPT Version :9

Sequence 1:NP_572657.2 Gene:CG2202 / 32014 FlyBaseID:FBgn0030240 Length:889 Species:Drosophila melanogaster
Sequence 2:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster


Alignment Length:745 Identity:171/745 - (22%)
Similarity:270/745 - (36%) Gaps:243/745 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 TVDAE--RVCRVCLKDVSLEGELHF-IFNETPVEQDANLARILDE-CTLHQCERNDGMPPHMCSS 99
            :|||.  :.||.|.:..|:..:|.. ..::.|:.:..|  .||.| |.:    :.|.||..:|.:
  Fly    12 SVDASMGKNCRACAEHSSILVDLFSKEISDPPIWEMLN--SILPEICRV----KRDEMPQKICPT 70

  Fly   100 CVEAARNAYRFKRHAERSYCSLVALLGRSPQLKARGAEAASQTDQVALLPCEMCHDQFLNSLELR 164
            |:.||:||:.|:...|:|:                                     ||.:.| |:
  Fly    71 CLVAAQNAFHFRHKCEQSF-------------------------------------QFFSQL-LQ 97

  Fly   165 LHRNQVHRTTKEATSAGTDGLPSEDFKCKFCPQHFPHLRQLRSHLARSHEQTARLQCAHCQRTFS 229
            |.::                                     .|:|:||          ||:|   
  Fly    98 LDKS-------------------------------------NSNLSRS----------HCRR--- 112

  Fly   230 RRDHLLRHIRNQHRDVEEDLLRTWPPADENTMNSDGGDELVSAEVLLNEEDNEDEVVGEAFQCNT 294
                                         .|||     .|:..|::..|:..:..|.  ....|.
  Fly   113 -----------------------------GTMN-----PLIPFEIVGCEDPLDTNVT--KLDANR 141

  Fly   295 NPISSNED---DGEEANGANQTLWLHIKPEPCLEAEEVDLAMQLKLEKKRRRREKAEAQAETSID 356
            ..:.::.|   ||:..||.        :.||..|..|:.:             ...:.:.|.||.
  Fly   142 PDVKTDIDEPTDGKATNGQ--------ESEPLQEVFEITM-------------NDIKTEDEVSIQ 185

  Fly   357 RTVKNEHIAIGDSQFSIKEENQLVGSDDEAPMGVEDFMKLHVSGELPLSDEERFDGFADDDSDLD 421
            .|.::          :..|||                                      |:::.|
  Fly   186 ETFED----------AFDEEN--------------------------------------DNNNTD 202

  Fly   422 DDDDDDDEEDAGDDDDGEFRLKQEPLDGEKPLKKAKSGRRRRRRNKDEPNPDNRCEVCQRTFSRH 486
            .:.:|.|:...|..:           |.::|......||:....|    |....|..|..::|..
  Fly   203 SEREDSDQWTVGSTE-----------DQDEPWIPGGGGRQTVGGN----NQSLLCTECGVSYSTQ 252

  Fly   487 CHLLRHKLSHLE----KKPHNCPHCPKAFARSDHLKAHVQSLHSNKEHKCSLCEAAFSRLDALER 547
            ..|.||...|.|    :|||.|..|.:.|..:..|..|.:.....:..||.||..|::....|:.
  Fly   253 KALARHVAKHKEQGDTQKPHLCDFCGRGFRTNAQLTTHRRRHTGERPFKCPLCPKAYTHGPTLKS 317

  Fly   548 HKVSKHNGEGLEPGSELKLQLAEHTCEYCSKRFSSKTYLRKHTLLHT-DFLYACKTCDETFRERA 611
            |..:....:|             |.|..|.|.|.::..||.|...|| :..|.|..|.:||.:.:
  Fly   318 HMHTHDEEKG-------------HKCPQCDKTFYTRGNLRAHIQRHTGERPYKCPDCPQTFAKNS 369

  Fly   612 QLREHEKTHTGQRNFLCCICGDSFARNDYLRVHMRRHNGEKPYKCRFCVKAFPRATDLKVHERYH 676
            .|:.|.:.|..:|.|.|.:||..|.:|.:|..|:|.|||::.:||..|.|:|...:::..|:|.|
  Fly   370 GLKLHSRLHKEERPFKCELCGKGFVQNQHLITHLRVHNGDRQFKCPDCDKSFFEKSNMMKHQRTH 434

  Fly   677 TGTKPNLCNTCGKSFHRAYNLTIHMRTHTGERPYKCDQCPKSFTQSNDLKAHIRRHTGER---YK 738
            :|.||..|..||::|...::|..|:|.||||:|||||||.|.|:.:..|..|...|....   :|
  Fly   435 SGIKPFKCEECGQAFSHNHHLKSHLRIHTGEKPYKCDQCGKGFSANQSLMKHTLWHVDNNDRPFK 499

  Fly   739 CPHCDAYFLQLYNMRNHCMSAHNKHIETKT 768
            |..|...:....::|.| ...|....|.||
  Fly   500 CSQCPKAYDTQQSLRGH-EKTHKNPDEPKT 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2202NP_572657.2 zf-AD 45..121 CDD:285071 23/77 (30%)
C2H2 Zn finger 150..171 CDD:275368 5/20 (25%)
C2H2 Zn finger 192..213 CDD:275370 3/20 (15%)
C2H2 Zn finger 221..239 CDD:275370 3/17 (18%)
COG5048 <443..730 CDD:227381 94/291 (32%)
C2H2 Zn finger 476..496 CDD:275368 6/19 (32%)
zf-H2C2_2 488..513 CDD:290200 11/28 (39%)
C2H2 Zn finger 504..525 CDD:275368 5/20 (25%)
C2H2 Zn finger 532..548 CDD:275368 5/15 (33%)
C2H2 Zn finger 573..593 CDD:275368 7/19 (37%)
C2H2 Zn finger 600..620 CDD:275368 6/19 (32%)
zf-H2C2_2 613..637 CDD:290200 9/23 (39%)
C2H2 Zn finger 628..648 CDD:275368 8/19 (42%)
zf-H2C2_2 640..663 CDD:290200 10/22 (45%)
C2H2 Zn finger 656..676 CDD:275368 6/19 (32%)
C2H2 Zn finger 684..704 CDD:275368 7/19 (37%)
zf-C2H2 684..704 CDD:278523 7/19 (37%)
zf-H2C2_2 696..721 CDD:290200 16/24 (67%)
C2H2 Zn finger 712..732 CDD:275368 8/19 (42%)
C2H2 Zn finger 739..755 CDD:275368 3/15 (20%)
MeicsNP_524062.1 zf-AD 21..95 CDD:285071 25/116 (22%)
C2H2 Zn finger 242..262 CDD:275368 6/19 (32%)
C2H2 Zn finger 274..294 CDD:275368 5/19 (26%)
zf-H2C2_2 287..311 CDD:290200 7/23 (30%)
C2H2 Zn finger 302..322 CDD:275368 6/19 (32%)
C2H2 Zn finger 330..350 CDD:275368 7/19 (37%)
zf-H2C2_2 342..366 CDD:290200 9/23 (39%)
C2H2 Zn finger 358..378 CDD:275368 6/19 (32%)
C2H2 Zn finger 386..406 CDD:275368 8/19 (42%)
COG5048 <395..583 CDD:227381 50/135 (37%)
zf-C2H2 412..434 CDD:278523 7/21 (33%)
C2H2 Zn finger 414..434 CDD:275368 6/19 (32%)
zf-H2C2_2 426..451 CDD:290200 10/24 (42%)
C2H2 Zn finger 442..462 CDD:275368 7/19 (37%)
zf-H2C2_2 454..478 CDD:290200 15/23 (65%)
C2H2 Zn finger 470..486 CDD:275368 7/15 (47%)
C2H2 Zn finger 500..520 CDD:275368 4/20 (20%)
C2H2 Zn finger 532..552 CDD:275370
C2H2 Zn finger 559..579 CDD:275370
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 91 1.000 Inparanoid score I2264
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D42822at6656
OrthoFinder 1 1.000 - - FOG0006715
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.060

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