DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2202 and CG10274

DIOPT Version :9

Sequence 1:NP_572657.2 Gene:CG2202 / 32014 FlyBaseID:FBgn0030240 Length:889 Species:Drosophila melanogaster
Sequence 2:NP_001097525.1 Gene:CG10274 / 38716 FlyBaseID:FBgn0035690 Length:863 Species:Drosophila melanogaster


Alignment Length:736 Identity:150/736 - (20%)
Similarity:233/736 - (31%) Gaps:268/736 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 VCRVCLKDVSLEG------ELHFIFNETPVEQDANLARILDECTLHQCERNDGMPPHMCSSCVEA 103
            |||:||..:...|      :|..|         ..||:.|..||....|::||.|..:|:.|...
  Fly    15 VCRICLNRLPENGGGAGSFDLFLI---------PGLAKKLCVCTSLAVEQSDGFPKCLCAQCFSR 70

  Fly   104 ARNAYRFKRHAERSYCSLVALLGRSPQLKARGAEAASQTDQVALLPCEMCHDQFLNSLELRLHRN 168
            ..:.:.|::                                       :|.|      .::..::
  Fly    71 LDDMHEFQK---------------------------------------LCVD------SVQKFQD 90

  Fly   169 QVHRTTKEATSAGTDGLPSEDFKCKFCPQHFPHLRQLRSHLARSHEQTARLQCAHCQRTFSRRDH 233
            .|.|..                   ||                                      
  Fly    91 MVARNV-------------------FC-------------------------------------- 98

  Fly   234 LLRHIRNQHRDVEEDLLRTWPPADENTMNSDGGDELVSAEVLLNEEDNEDEVVGEAFQCNTNPIS 298
                                |||.....|.|          |||...||.|:||:          
  Fly    99 --------------------PPASAQMKNFD----------LLNVAGNEPELVGQ---------- 123

  Fly   299 SNEDDGEEANGANQTLWLHIKPEPCLE------AEEVDLAMQLKLEKKRRRREKAEAQAETSIDR 357
             :|:|             .|..:|.|:      ..|.|:...|         |..:.:|| .:::
  Fly   124 -DEED-------------RINFDPLLDHKMEMIENEEDVFKML---------EHVDKEAE-QVEK 164

  Fly   358 TVKNEHIAIGDSQFSIKEENQLVGSDDEAPMGVEDFMKLHVSGELPLSDEERFDGFADDDSDLDD 422
            .||.:.:                   |.|     |.|.:             |...:.::|:.|.
  Fly   165 EVKQDEL-------------------DAA-----DLMTI-------------FAAESSEESEEDI 192

  Fly   423 DDDDDDEEDAGDDDDGEFRLKQEPLDGEKPLKKAKS--------------------GRRRRRRNK 467
            |.|.|.|.::.|.|| :..|.|...|..:.:.|||:                    |.:.:.|.|
  Fly   193 DQDVDFEPNSSDGDD-DVPLAQRLRDNSRMIPKAKAAVIKEEDQEFPTGSEEEDEDGEKSKSRRK 256

  Fly   468 DEPNPDNR-------CEVCQRTFSRHCHLLRHKLSHLEKKPHNC--PHCPKAFARSDHLKAHVQS 523
            ..| |..|       |.:|.:.|.:......|...|.:..|..|  ..|.|.|..:..|:.|:..
  Fly   257 RIP-PGERHLHRIIDCHICHQKFKKAIRYEEHMKHHNDLLPFQCKVETCRKGFTTAGGLRLHIDH 320

  Fly   524 LHS--NKEHKCSL--CEAAFSRLDALERHKVSKHNGEGLEPGSELKLQLAEHTCEYCSKRFSSKT 584
            .|:  ::.|.|::  |...|.|:..|..|....|   |:   ::......::.|..|.|.|....
  Fly   321 AHTELSEVHSCNVDGCGKTFPRIRLLTFHMKKMH---GI---TKAAAPPRDYPCTECEKVFRCPM 379

  Fly   585 YLRKHTLLH--TDFLYACKTCDETFRERAQLREHEKTHTGQRNFLCCICGDSFARNDYLRVHMRR 647
            .|:||...|  .:..:.|..|.:.|...:.|::|...|.|.:|::|..||...........|:..
  Fly   380 ALKKHMYKHDGKELPFPCNICGKRFVINSALKDHLMRHAGIKNYVCPYCGVGKTTRQEWNTHILT 444

  Fly   648 HNGEKPYKCRFCVKAFPRATDLKVHER-YHTGTKPNLCNTCGKSFHRAYNLTIHMRTHTGERPYK 711
            |..||.:||..|..|......|..|.: .|...|...|..|||:|.:::...||..|||||:..:
  Fly   445 HTQEKKFKCHICEHASHNKQSLANHIKIVHEKIKNYACQYCGKTFGKSHACKIHEMTHTGEKRCE 509

  Fly   712 CDQCPKSFTQSNDLKAHIRRH 732
            |..|.|.|.....|..|::.|
  Fly   510 CKVCGKKFLYPKSLTKHLKTH 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2202NP_572657.2 zf-AD 45..121 CDD:285071 20/81 (25%)
C2H2 Zn finger 150..171 CDD:275368 2/20 (10%)
C2H2 Zn finger 192..213 CDD:275370 2/20 (10%)
C2H2 Zn finger 221..239 CDD:275370 0/17 (0%)
COG5048 <443..730 CDD:227381 82/322 (25%)
C2H2 Zn finger 476..496 CDD:275368 4/19 (21%)
zf-H2C2_2 488..513 CDD:290200 7/26 (27%)
C2H2 Zn finger 504..525 CDD:275368 6/22 (27%)
C2H2 Zn finger 532..548 CDD:275368 5/17 (29%)
C2H2 Zn finger 573..593 CDD:275368 7/19 (37%)
C2H2 Zn finger 600..620 CDD:275368 5/19 (26%)
zf-H2C2_2 613..637 CDD:290200 8/23 (35%)
C2H2 Zn finger 628..648 CDD:275368 4/19 (21%)
zf-H2C2_2 640..663 CDD:290200 7/22 (32%)
C2H2 Zn finger 656..676 CDD:275368 5/20 (25%)
C2H2 Zn finger 684..704 CDD:275368 7/19 (37%)
zf-C2H2 684..704 CDD:278523 7/19 (37%)
zf-H2C2_2 696..721 CDD:290200 11/24 (46%)
C2H2 Zn finger 712..732 CDD:275368 6/19 (32%)
C2H2 Zn finger 739..755 CDD:275368
CG10274NP_001097525.1 zf-AD 15..90 CDD:214871 22/128 (17%)
C2H2 Zn finger 334..353 CDD:275368 5/18 (28%)
C2H2 Zn finger 368..388 CDD:275368 7/19 (37%)
COG5048 394..729 CDD:227381 42/137 (31%)
C2H2 Zn finger 397..417 CDD:275368 5/19 (26%)
C2H2 Zn finger 425..445 CDD:275368 4/19 (21%)
C2H2 Zn finger 453..474 CDD:275368 5/20 (25%)
C2H2 Zn finger 482..502 CDD:275368 7/19 (37%)
C2H2 Zn finger 510..530 CDD:275368 6/19 (32%)
C2H2 Zn finger 638..659 CDD:275368
C2H2 Zn finger 667..687 CDD:275368
zf-H2C2_2 680..704 CDD:290200
C2H2 Zn finger 695..715 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24388
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.