DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2202 and Zfp958

DIOPT Version :9

Sequence 1:NP_572657.2 Gene:CG2202 / 32014 FlyBaseID:FBgn0030240 Length:889 Species:Drosophila melanogaster
Sequence 2:XP_038944925.1 Gene:Zfp958 / 100302405 RGDID:2311392 Length:495 Species:Rattus norvegicus


Alignment Length:432 Identity:138/432 - (31%)
Similarity:205/432 - (47%) Gaps:78/432 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   401 ELPLSDEERFDGFADDDSDLDDDDDDDDEEDAG-DDDDGEF------RLKQEPLDGEKPLKKAKS 458
            |.|..|.:..:.||...|....:.....|:..| :..|..|      |:.:....|||..|..:.
  Rat    72 EKPYEDMKCGEAFAHRSSLRAHERTHTGEKPYGCNQCDKAFAYHSSLRIHERTHTGEKLYKCIQC 136

  Fly   459 GR--------RRRRRNKDEPNPDNRCEVCQRTFSRHCHLLRHKLSHLEKKPHNCPHCPKAFARSD 515
            |:        :|.:|...|..| .:|..|.:.|:.|..|.:|:.:|..:||:.|..|.||||...
  Rat   137 GKAFSDQNTLQRHKRTHSEEKP-CKCNQCGKAFAHHSSLRKHERTHTGEKPYGCNQCDKAFACHS 200

  Fly   516 HLKAHVQSLHSNKEHKCSLCEAAFSRLDALERHKVSKHNGEGLEPGSELKLQLAEHTCEYCSKRF 580
            .|:.|.::....|.::|:.|:.||:...:|::|: ..|.||  :|          :.|..|.|.|
  Rat   201 SLRRHERTHTGEKPYECNQCDKAFAYHSSLQKHE-RTHTGE--KP----------YGCNQCDKAF 252

  Fly   581 SSKTYLRKHTLLHT-DFLYACKTCDETFRERAQLREHEKTHTGQRNFLCCICGDSFARNDYLRVH 644
            :..:.||||...|| :..|.|..|.:.|...:.||:||:.|||::.:.|..||.:|:..:.||||
  Rat   253 ACHSSLRKHERTHTGEKPYECNQCGKAFACHSTLRKHERIHTGEKPYECNQCGKAFSMQNTLRVH 317

  Fly   645 MRRHNGEKPYKCRFCVKAFPRATDLKVHERYHTGTKPNLCNTCGKSF--------HRAYN----- 696
            .|.|.||||::|..|.|.|...:.|::|:|.|||.||:.|:.|||:|        |:..:     
  Rat   318 ERTHTGEKPFECNQCGKTFKLHSQLRIHKRVHTGEKPHECDQCGKTFACPSSFQKHKRVHSGEKP 382

  Fly   697 ---------------LTIHMRTHTGERPYKCDQCPKSFTQSNDLKAHIRRHTGER-YKCPHCDAY 745
                           |..|.||||||:|:||:||.|:|:|||.|:.|.|.||||: |:|..|...
  Rat   383 YGCNQCDKAFAIHSRLRKHERTHTGEKPFKCNQCGKTFSQSNSLQVHKRTHTGEKPYECNQCGKA 447

  Fly   746 FLQLYNMR--------------NHCMSAHNKHIETKTGRLQR 773
            |....::|              |.|..|...|     ..|||
  Rat   448 FPYDSSLRVHERTHTGMKPYECNQCGKAFGYH-----SHLQR 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2202NP_572657.2 zf-AD 45..121 CDD:285071
C2H2 Zn finger 150..171 CDD:275368
C2H2 Zn finger 192..213 CDD:275370
C2H2 Zn finger 221..239 CDD:275370
COG5048 <443..730 CDD:227381 110/323 (34%)
C2H2 Zn finger 476..496 CDD:275368 6/19 (32%)
zf-H2C2_2 488..513 CDD:290200 10/24 (42%)
C2H2 Zn finger 504..525 CDD:275368 8/20 (40%)
C2H2 Zn finger 532..548 CDD:275368 5/15 (33%)
C2H2 Zn finger 573..593 CDD:275368 8/19 (42%)
C2H2 Zn finger 600..620 CDD:275368 7/19 (37%)
zf-H2C2_2 613..637 CDD:290200 11/23 (48%)
C2H2 Zn finger 628..648 CDD:275368 9/19 (47%)
zf-H2C2_2 640..663 CDD:290200 13/22 (59%)
C2H2 Zn finger 656..676 CDD:275368 7/19 (37%)
C2H2 Zn finger 684..704 CDD:275368 9/47 (19%)
zf-C2H2 684..704 CDD:278523 9/47 (19%)
zf-H2C2_2 696..721 CDD:290200 15/44 (34%)
C2H2 Zn finger 712..732 CDD:275368 11/19 (58%)
C2H2 Zn finger 739..755 CDD:275368 4/29 (14%)
Zfp958XP_038944925.1 KRAB 4..44 CDD:396083
C2H2 Zn finger 80..97 CDD:275368 3/16 (19%)
C2H2 Zn finger 105..125 CDD:275368 3/19 (16%)
COG5048 129..490 CDD:227381 125/375 (33%)
C2H2 Zn finger 133..153 CDD:275368 3/19 (16%)
C2H2 Zn finger 161..181 CDD:275368 6/19 (32%)
C2H2 Zn finger 189..209 CDD:275368 8/19 (42%)
C2H2 Zn finger 217..237 CDD:275368 6/20 (30%)
C2H2 Zn finger 245..265 CDD:275368 8/19 (42%)
C2H2 Zn finger 273..293 CDD:275368 7/19 (37%)
C2H2 Zn finger 301..321 CDD:275368 9/19 (47%)
C2H2 Zn finger 329..349 CDD:275368 7/19 (37%)
C2H2 Zn finger 357..377 CDD:275368 6/19 (32%)
C2H2 Zn finger 385..405 CDD:275368 3/19 (16%)
C2H2 Zn finger 413..433 CDD:275368 11/19 (58%)
C2H2 Zn finger 441..461 CDD:275368 4/19 (21%)
C2H2 Zn finger 469..489 CDD:275368 7/21 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.