DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2202 and zbtb49

DIOPT Version :9

Sequence 1:NP_572657.2 Gene:CG2202 / 32014 FlyBaseID:FBgn0030240 Length:889 Species:Drosophila melanogaster
Sequence 2:NP_001076468.1 Gene:zbtb49 / 100009630 ZFINID:ZDB-GENE-070209-170 Length:524 Species:Danio rerio


Alignment Length:196 Identity:71/196 - (36%)
Similarity:104/196 - (53%) Gaps:34/196 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   598 YACKTCDETFRERAQLREHEKTHTGQRNFLCCICGDSFARNDYLRVHMRRHNGEKPYKCRFCVKA 662
            |.|:.|.:||:..:.|..|:::|||::.|.|.:||.:|::...|:.|:|||:|||||.|..|.|:
Zfish   280 YCCEVCGKTFKHPSNLELHKRSHTGEKPFQCSVCGKAFSQAGNLQTHLRRHSGEKPYICELCGKS 344

  Fly   663 FPRATDLKVHERYHTGTKPNLCNTCGKSFHRAYNLTIHMRTHTGERPYKCDQCPKSFTQ------ 721
            |..:.|::.|...|:|.:|:||:.||:.|....||..|.:||..||.:.||||.|||..      
Zfish   345 FAASGDVQRHIIIHSGARPHLCDVCGRGFSNFSNLKEHKKTHRAEREFTCDQCGKSFNMQRKLLK 409

  Fly   722 ----------------------SNDLKAHIRRHTGER-YKCPHCDAYFLQLYNMRNH-----CMS 758
                                  |.||:.|:|.||||| |.|..|...|.:...:|.|     |:|
Zfish   410 HKSRHSGDKPYCCQTCGKCFAGSGDLQRHVRSHTGERPYVCDACGKSFSRTAVLRRHRSAGVCVS 474

  Fly   759 A 759
            :
Zfish   475 S 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2202NP_572657.2 zf-AD 45..121 CDD:285071
C2H2 Zn finger 150..171 CDD:275368
C2H2 Zn finger 192..213 CDD:275370
C2H2 Zn finger 221..239 CDD:275370
COG5048 <443..730 CDD:227381 57/159 (36%)
C2H2 Zn finger 476..496 CDD:275368
zf-H2C2_2 488..513 CDD:290200
C2H2 Zn finger 504..525 CDD:275368
C2H2 Zn finger 532..548 CDD:275368
C2H2 Zn finger 573..593 CDD:275368
C2H2 Zn finger 600..620 CDD:275368 6/19 (32%)
zf-H2C2_2 613..637 CDD:290200 10/23 (43%)
C2H2 Zn finger 628..648 CDD:275368 7/19 (37%)
zf-H2C2_2 640..663 CDD:290200 13/22 (59%)
C2H2 Zn finger 656..676 CDD:275368 6/19 (32%)
C2H2 Zn finger 684..704 CDD:275368 7/19 (37%)
zf-C2H2 684..704 CDD:278523 7/19 (37%)
zf-H2C2_2 696..721 CDD:290200 14/24 (58%)
C2H2 Zn finger 712..732 CDD:275368 12/47 (26%)
C2H2 Zn finger 739..755 CDD:275368 4/15 (27%)
zbtb49NP_001076468.1 zf-H2C2_2 322..346 CDD:290200 13/23 (57%)
C2H2 Zn finger 338..358 CDD:275368 6/19 (32%)
C2H2 Zn finger 366..386 CDD:275368 7/19 (37%)
zf-H2C2_2 378..402 CDD:290200 13/23 (57%)
C2H2 Zn finger 394..414 CDD:275368 7/19 (37%)
zf-H2C2_2 407..430 CDD:290200 0/22 (0%)
C2H2 Zn finger 422..442 CDD:275368 5/19 (26%)
zf-H2C2_2 434..459 CDD:290200 13/24 (54%)
C2H2 Zn finger 450..467 CDD:275368 4/16 (25%)
BTB 15..118 CDD:279045
BTB 26..118 CDD:197585
zf-C2H2 280..302 CDD:278523 7/21 (33%)
C2H2 Zn finger 282..302 CDD:275368 6/19 (32%)
COG5048 <292..466 CDD:227381 63/173 (36%)
zf-H2C2_2 294..319 CDD:290200 10/24 (42%)
C2H2 Zn finger 310..330 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.