DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgls and EMB2024

DIOPT Version :10

Sequence 1:NP_572656.1 Gene:Pgls / 32013 FlyBaseID:FBgn0030239 Length:243 Species:Drosophila melanogaster
Sequence 2:NP_568445.1 Gene:EMB2024 / 832511 AraportID:AT5G24400 Length:325 Species:Arabidopsis thaliana


Alignment Length:240 Identity:85/240 - (35%)
Similarity:125/240 - (52%) Gaps:19/240 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 EEQLVQALGDLLQRCSQEALAKHDKFSVGLSGGSLVQLLTKALKS---CNLKTAKWVFFFCDERY 77
            ||.||..|.......|.:...:...|:|.:|||||::.|.|.::|   .::..|:|.||:.|||.
plant    89 EENLVIDLAKFTADLSDKFCKERGAFTVVVSGGSLIKSLRKLVESPYVDSIDWARWHFFWVDERV 153

  Fly    78 VRLDDSDSTYGAYRAEWLTQLPCIQESQFVRADTSQPLDACAADYEAKVKSQVD----------- 131
            |..:..||.|......:|:::| |........:.:...:|.|.|||..:|..|:           
plant   154 VPKNHDDSNYKLAYDSFLSKVP-IPPGNVYAINEALSAEAAADDYETCLKHLVNTNILRVSESTG 217

  Fly   132 --RFDLLLLGMGPDGHTCSLFPEQPATLQETKRLVIPIRNSPKPPPERITFTLPLINKARNVAFV 194
              :|||:|||||||||..||||.. ....|:|:.|:.|.:|||||.||||||.|:||.:.:||.|
plant   218 FPKFDLMLLGMGPDGHVASLFPGH-GLCNESKKWVVSISDSPKPPSERITFTFPVINSSAHVALV 281

  Fly   195 VTGAAKASVVKSVFVDLDKKFPAAWVNPTKGQLTLIVDAGAGKEI 239
            |.|:.||..|::.........||..|: .:.:|...:|..|..::
plant   282 VCGSGKAEAVEAALKKTGNVPPAGSVS-AEDELVWFLDKPASSKL 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PglsNP_572656.1 Glucosamine_iso 14..228 CDD:460101 82/227 (36%)
EMB2024NP_568445.1 SugarP_isomerase 78..325 CDD:469729 85/238 (36%)

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