DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgls and Gnpda2

DIOPT Version :10

Sequence 1:NP_572656.1 Gene:Pgls / 32013 FlyBaseID:FBgn0030239 Length:243 Species:Drosophila melanogaster
Sequence 2:NP_001033104.1 Gene:Gnpda2 / 67980 MGIID:1915230 Length:276 Species:Mus musculus


Alignment Length:185 Identity:53/185 - (28%)
Similarity:79/185 - (42%) Gaps:34/185 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 FSVGLSGGS----LVQLLTKALKSCNLKTAKWVFFFCDERYVRLD-DSDSTYGAYRAEWLTQLPC 100
            ||:||..||    ..:.|.:..||.|| :.|:|..|..:.||.|. :...:|.:|.  |......
Mouse    35 FSLGLPTGSTPLGCYKKLIEYHKSGNL-SFKYVKTFNMDEYVGLPRNHPESYHSYM--WNNFFKH 96

  Fly   101 IQESQFVRADTSQPLDACAAD-------YEAKVKSQVDRFDLLLLGMGPDGHTCSLFPEQPATLQ 158
            |.    :..:.:..||..|||       :|.|:| :....||.:.|:|||||..  |.|..::|.
Mouse    97 ID----IDPNNAHILDGNAADLQAECDAFEEKIK-EAGGIDLFVGGIGPDGHIA--FNEPGSSLV 154

  Fly   159 ETKRLVIPIRNS------------PKPPPERITFTLPLINKARNVAFVVTGAAKA 201
            ...||.....::            .|.|...:|..:..:..||.|..::|||.||
Mouse   155 SRTRLKTLAMDTILANAKYFDGDLSKVPTMALTVGVGTVMDAREVMILITGAHKA 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PglsNP_572656.1 Glucosamine_iso 14..228 CDD:460101 53/185 (29%)
Gnpda2NP_001033104.1 nagB 1..258 CDD:179028 53/185 (29%)

Return to query results.
Submit another query.