DRSC/TRiP Functional Genomics Resources

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Protein Alignment Imp and FUBP3

DIOPT Version :9

Sequence 1:NP_001245616.1 Gene:Imp / 32009 FlyBaseID:FBgn0285926 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_003925.1 Gene:FUBP3 / 8939 HGNCID:4005 Length:572 Species:Homo sapiens


Alignment Length:622 Identity:134/622 - (21%)
Similarity:216/622 - (34%) Gaps:191/622 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 QAQRAAVGLNGVEFEGSKLHAEQL-DKNQRRSQRNQRNPY--PGMPGPGRQADFPL--------- 145
            |.|.|.||:....|..:.....|: .|.......|...|.  |.:.|.|.|.. ||         
Human     6 QGQSAPVGMKAEGFVDALHRVRQIAAKIDSIPHLNNSTPLVDPSVYGYGVQKR-PLDDGVGNQLG 69

  Fly   146 -----RILVQSE------MVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYGNPEN 199
                 |.::..|      |||.||||.|..|..|..:|..::.: ..|:.|..|:...:.|.||:
Human    70 ALVHQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQI-ASESSGIPERPCVLTGTPES 133

  Fly   200 CTNACKRILEVMQQEAISTNKGELSPEC------------SEICLKILAHNNLIGRIIGKSGNTI 252
            ...| ||:|            |::...|            :....:||...:.:|.:||:.|.||
Human   134 IEQA-KRLL------------GQIVDRCRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETI 185

  Fly   253 KRIMQDTDTKITVSSINDINSFNLERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQSLM 317
            |::.:.|..|:.:.....:.: ..::.:.:.|....:.:|...:...:|:..:.|          
Human   186 KQLQERTGVKMVMIQDGPLPT-GADKPLRITGDAFKVQQAREMVLEIIREKDQAD---------- 239

  Fly   318 FPGLHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTYLYIPNNAVGAI 382
            |.|:.        |:   ||:.|...|.:                         :.:|..|||.:
Human   240 FRGVR--------GD---FNSRMGGGSIE-------------------------VSVPRFAVGIV 268

  Fly   383 IGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMIFE----KMREE 443
            ||..|..|:.|...:...::..|.|...|     ||...::|.|:....|.::|.|    ....:
Human   269 IGRNGEMIKKIQNDAGVRIQFKPDDGISP-----ERAAQVMGPPDRCQHAAHIISELILTAQERD 328

  Fly   444 GF--------------------MCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK 488
            ||                    ..|..::..|    |.:.:.|.:|||||:|::.:.:.:|:.::
Human   329 GFGGLAAARGRGRGRGDWSVGAPGGVQEITYT----VPADKCGLVIGKGGENIKSINQQSGAHVE 389

  Fly   489 LPEHALAPPSGGDEETPVHIIGLFYSVQSAQRRIRAMMLSTNPPPITKKQKAAKEQLQQQQQSLA 553
            |..:  .||:.........|.|:...::.|::.|...:..||                      .
Human   390 LQRN--PPPNSDPNLRRFTIRGVPQQIEVARQLIDEKVGGTN----------------------L 430

  Fly   554 GAASSGSQQ--QQPQSPSQQQALPPQL---------------HHQPVSSASSSSTPPAH-HQQQA 600
            ||..:..|.  .||.:|..|...||:.               |..|||.      |||. .|...
Human   431 GAPGAFGQSPFSQPPAPPHQNTFPPRSSGCFPNMAAKVNGNPHSTPVSG------PPAFLTQGWG 489

  Fly   601 STAATSHQLQQQQPSPPPPGNATAAAAQQQQQLASSQ 637
            ||.....|..||.||             ||.|..|||
Human   490 STYQAWQQPTQQVPS-------------QQSQPQSSQ 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ImpNP_001245616.1 RRM <37..>146 CDD:223796 16/69 (23%)
RRM2_VICKZ 42..118 CDD:240805 7/25 (28%)
KH-I 145..208 CDD:238053 23/82 (28%)
KH-I 232..296 CDD:238053 13/63 (21%)
KH-I 369..436 CDD:238053 17/66 (26%)
KH-I 455..522 CDD:238053 16/66 (24%)
FUBP3NP_003925.1 KH-I 78..148 CDD:412160 23/83 (28%)
KH-I 159..241 CDD:412160 15/92 (16%)
KH-I 252..321 CDD:412160 20/98 (20%)
KH-I 356..424 CDD:412160 17/73 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 426..521 32/129 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141656
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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