DRSC/TRiP Functional Genomics Resources

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Protein Alignment Imp and KHSRP

DIOPT Version :10

Sequence 1:NP_001245616.1 Gene:Imp / 32009 FlyBaseID:FBgn0285926 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_001353228.1 Gene:KHSRP / 8570 HGNCID:6316 Length:747 Species:Homo sapiens


Alignment Length:626 Identity:124/626 - (19%)
Similarity:215/626 - (34%) Gaps:181/626 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 FEGSKLHAEQLDKNQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSE------MVGAIIGRQGST 164
            |.|.|...|..|:.:.:...:|.:......||...   |.|..:..|      |||.||||.|..
Human   105 FGGQKRQLEDGDQPESKKLASQGDSISSQLGPIHP---PPRTSMTEEYRVPDGMVGLIIGRGGEQ 166

  Fly   165 IRTITQQSRARVDVHRKENVGSLEKSITIYGNPENCTNACKRILEVMQQEAISTNKGELSPECSE 229
            |..|.|.|..:|.: ..::.|..|:|:::.|.||:...|     ::|..:.:|..:|....:..:
Human   167 INKIQQDSGCKVQI-SPDSGGLPERSVSLTGAPESVQKA-----KMMLDDIVSRGRGGPPGQFHD 225

  Fly   230 --------ICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNLERIITVKGLI 286
                    ...:|:......|.:|||.|.|||::.:....|:.:......|: |:::.:.:.|..
Human   226 NANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNT-NVDKPLRIIGDP 289

  Fly   287 ENMSRAENQISTKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTPGNGMVFNTSMPFPSCQSFAMS 351
            ..:.:|...:...||   |.|......::         ...|..|.|:                 
Human   290 YKVQQACEMVMDILR---ERDQGGFGDRN---------EYGSRIGGGI----------------- 325

  Fly   352 KTPASVVPPVFPNDLQETTYLYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQT 416
                 .||              :|.::||.:||..|..|:.|...:...::....|...|     
Human   326 -----DVP--------------VPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP----- 366

  Fly   417 ERKVTIVGTPEGQWKAQYMIFEKM------------------------REEGFMCGTDDVRLTVE 457
            |:...|:|.|:....|..:|.:.:                        |.:| ..|.....:|..
Human   367 EKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQG-NWGPPGGEMTFS 430

  Fly   458 LLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHII-----GLFYSVQS 517
              :.:.:.|.:||:||:||:.:.:.||:.:::....   |..||....:.||     .:.::.|.
Human   431 --IPTHKCGLVIGRGGENVKAINQQTGAFVEISRQL---PPNGDPNFKLFIIRGSPQQIDHAKQL 490

  Fly   518 AQRRIRAMMLSTNPPPITKKQKAAKEQLQQQQQSLAGAASSGS---------QQQQPQSPSQQQA 573
            .:.:|...:....|.|                   .|...:|.         .|..|.:|.....
Human   491 IEEKIEGPLCPVGPGP-------------------GGPGPAGPMGPFNPGPFNQGPPGAPPHAGG 536

  Fly   574 LPPQLH-----------------HQPVSSASSSSTPPA-------HHQQQ-------ASTAATSH 607
            .||..:                 |.|..:|::::.|.|       |:.||       .:.|..:.
Human   537 PPPHQYPPQGWGNTYPQWQPPAPHDPSKAAAAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAP 601

  Fly   608 QLQQQQPSPPPPGNATAAAA----------QQQQQLASSQQ 638
            ..|.:.|.|||.|.:....|          |.||..|..||
Human   602 PAQGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQ 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ImpNP_001245616.1 RRM2_VICKZ 42..118 CDD:409794 4/11 (36%)
KH-I_IGF2BP_rpt1 144..211 CDD:411828 23/72 (32%)
KH-I_IGF2BP_rpt2 231..302 CDD:411829 15/70 (21%)
KH-I_IGF2BP_rpt3 368..437 CDD:411830 15/68 (22%)
KH-I_IGF2BP_rpt4 455..523 CDD:411831 16/72 (22%)
KHSRPNP_001353228.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..147 10/44 (23%)
KH-I_FUBP2_rpt1 145..215 CDD:411907 23/75 (31%)
KH-I_FUBP2_rpt2 233..305 CDD:411910 16/75 (21%)
KH-I_FUBP2_rpt3 323..390 CDD:411913 19/107 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 392..429 3/37 (8%)
KH-I_FUBP2_rpt4 426..494 CDD:411916 16/72 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 497..569 12/90 (13%)
4 X 12 AA imperfect repeats 571..684 19/72 (26%)
DUF1897 671..>685 CDD:462653
Blue background indicates that the domain is not in the aligned region.

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