DRSC/TRiP Functional Genomics Resources

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Protein Alignment Imp and AT1G33680

DIOPT Version :9

Sequence 1:NP_001245616.1 Gene:Imp / 32009 FlyBaseID:FBgn0285926 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_174629.3 Gene:AT1G33680 / 840259 AraportID:AT1G33680 Length:763 Species:Arabidopsis thaliana


Alignment Length:744 Identity:133/744 - (17%)
Similarity:218/744 - (29%) Gaps:268/744 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 DLELSKEDREQIFD------PPLDRQQLEGAGTSSVTTSKILISGIPMQTRFEDIEPLLKPYGIV 68
            |.::|.:|.:...|      |.||.:.::|.|..                            |.|
plant    37 DNDVSVDDDKNASDYCQPKRPKLDDEAVDGLGIG----------------------------GTV 73

  Fly    69 KQCEAISSKDQNTQTVHITFENP-EQAQRAAVGLNGVEFEGSKLHAEQLDKNQRRSQRNQRNPYP 132
            :....:.||::.|       |.| .|:.....|...:|.....:.||:.|.....:.:.:.|.  
plant    74 ENSGDVESKEEGT-------EKPIAQSDENQDGNPLIEKVQETIDAEESDNKMEDNGKPEDNQ-- 129

  Fly   133 GMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSIT--IYG 195
                           ||..|:|         |.:.::.:....|::...:|.|..:...|  :..
plant   130 ---------------LVTPEVV---------TSQDVSVEESKEVNISGSQNEGEDDSKETNDVVA 170

  Fly   196 NPENCTNACKRILEVMQQEAISTNKG-------------ELSPECSEI---------------CL 232
            ..| ..|..|.:.:...|:....|.|             |:..|..|:               ..
plant   171 QKE-VENGSKEVTDCDSQKEDEANAGGESKEVNGSVSHDEIGDESKEVNGGSTHKEVDDTQSTTR 234

  Fly   233 KILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNLERIITVKGLIENMSRAENQIS 297
            :|...::.:|.:|||.|..::.:..::..||.:....:.:..:..|.:.:.|.:..:.:||..|:
plant   235 RIDVPSSKVGTLIGKGGEMVRYLQVNSGAKIQIRRDAEADPSSALRPVEIIGTVSCIEKAEKLIN 299

  Fly   298 TKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVF 362
            .                                                  .:::..|..||.:.
plant   300 A--------------------------------------------------VIAEVEAGGVPALA 314

  Fly   363 PNDLQETTYLYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPE 427
            ...:.|...:.:|::.||.|||..|..|:::...|.|.:::.|.:..   |...||.|.|.|...
plant   315 ARGVPEQMEIKVPSDKVGVIIGRGGETIKNMQTKSRARIQLIPQNEG---DASKERTVRISGDKR 376

  Fly   428 GQWKAQYMIFEKMREEG----FMCGTDDVRLTVELLVASSQVGRIIGKGG--------------- 473
            ....|..:|.:.|.::|    :..|            .:.|..:..|.||               
plant   377 QIDIATALIKDVMYQDGRPSPYSGG------------FNQQAYQPRGPGGPPQWGSRGPHGPHSM 429

  Fly   474 ------------QNVRELQRVTGSVIKLPEHALAPP----------------------------S 498
                        |         ||..:.|.....||                            .
plant   430 PYNYHHGGPYPSQ---------GSHFRPPNSGGYPPQHMPPRSGYGSGWEQRPPHSGPYDYYGRQ 485

  Fly   499 GGDEETPVHIIGLFYSVQSAQRRIRAMMLS---TNPPPITKKQKAAKEQLQQQQQSLAG------ 554
            ||....||...|..||...||:....|...   .|||               ..||..|      
plant   486 GGQNPGPVPSHGASYSQAGAQQTYGQMYDQPHYDNPP---------------MHQSYGGYGGSQQ 535

  Fly   555 ---AASSGSQQQQPQSPSQQQALPPQLHHQPVSSASSSSTP-----PAHHQQQASTAATSHQLQQ 611
               :|....|.|||..|...|....|.:..|..:|.....|     ||.....::.||.|:....
plant   536 GYPSAGGQHQMQQPSRPYGMQGSAEQGYGPPRPAAPPGDVPYQGPTPAAPSYGSTPAAASYGSTP 600

  Fly   612 QQPS----PPPPGNATAAAAQQQQQLASS 636
            ..||    |..|...:..|.|||...|||
plant   601 AAPSYGSTPAAPSYGSNMAQQQQYGYASS 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ImpNP_001245616.1 RRM <37..>146 CDD:223796 14/109 (13%)
RRM2_VICKZ 42..118 CDD:240805 12/76 (16%)
KH-I 145..208 CDD:238053 12/64 (19%)
KH-I 232..296 CDD:238053 12/63 (19%)
KH-I 369..436 CDD:238053 18/66 (27%)
KH-I 455..522 CDD:238053 19/121 (16%)
AT1G33680NP_174629.3 KH_1 233..298 CDD:278442 12/64 (19%)
KH-I 322..386 CDD:238053 18/66 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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