DRSC/TRiP Functional Genomics Resources

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Protein Alignment Imp and HEN4

DIOPT Version :10

Sequence 1:NP_001245616.1 Gene:Imp / 32009 FlyBaseID:FBgn0285926 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_001190612.1 Gene:HEN4 / 836560 AraportID:AT5G64390 Length:866 Species:Arabidopsis thaliana


Alignment Length:725 Identity:140/725 - (19%)
Similarity:241/725 - (33%) Gaps:267/725 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 VEFEGSKLHAEQLD---------KNQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIG 159
            :|....|.|||:..         .:.:|.:.:.......:..|...|.|  |:|.....|||:||
plant     1 MERNSVKFHAEKRSGAFDPGSGFGSSKRVKTHHTQLLSALVVPVGHAAF--RLLCPLSHVGAVIG 63

  Fly   160 RQGSTIRTITQQSRARVDVHRKENVGSLEKSITIY----------------GNPE---------- 198
            :.|:.|:.:.|.:.|::.|....: ||.::.|||.                ||.|          
plant    64 KSGNVIKQLQQSTGAKIRVEEPPS-GSPDRVITIIAQADSKSRVKLGANNNGNAEGEKKEEEVEV 127

  Fly   199 -NCTNACKRILEVMQQEAISTNKGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTK 262
             ....|..::.|::..||.|.         :.:| ::|..::..|.:|||.|..:..|.::|..|
plant   128 SKAQGALIKVFELLAAEADSD---------TVVC-RLLTESSHAGAVIGKGGQMVGSIRKETGCK 182

  Fly   263 ITVSSIN-------DINSFNLE-RIITVKGLIENMSRA------------------ENQISTKLR 301
            |::...|       |.....:| ..|.||..:.::||.                  |.:....|.
plant   183 ISIRIENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQNCQSIDKVRMVGNRPLEKEFQASLH 247

  Fly   302 QSYENDLQAMAPQSL-------------MFP---------------------------------- 319
            :..|..:|...|:|:             :||                                  
plant   248 RPIETIIQESLPRSVEVNPYDYRLRNDEIFPRGTVARANDVIPHDTLHLRRIEAVPQGALRMHIE 312

  Fly   320 ------------------------------------------------------GLH-PMAMMST 329
                                                                  .|| |..|:..
plant   313 ADRQDVLRRHVEADRQDALRRRIDVVPQETLYMPSDVLRGDCFRQHRERDDSHDSLHRPFEMVPR 377

  Fly   330 PGNGMVFNT----------------------------------SMPFPSCQSFAMSKTPASVVPP 360
            ...||.|.:                                  :.|.....|.:|:.| |::.||
plant   378 DAMGMPFESFPRDAYGRPIETMTQETLRGQSADYLAHRYSTLDTHPHSFTTSASMANT-ATMKPP 441

  Fly   361 VFPNDL----QETTY--LYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERK 419
              |:::    |:..:  |....|| |.:|||.|..:|.:...:.|.:.:.     ..||...||.
plant   442 --PSEVEVGNQDVVFKILCSTENA-GGVIGTGGKVVRMLHSETGAFINVG-----NTLDDCEERL 498

  Fly   420 VTIVGT--PEGQ----WKAQYMIFEKMREEGFMCGTDDV-------RLTVELLVASSQVGRIIGK 471
            :.:..:  ||.|    .||..:||.::    |...|:.:       .:|..|:|.:||:|.::||
plant   499 IAVTASENPECQSSPAQKAIMLIFSRL----FELATNKILDNGPRSSITARLVVPTSQIGCVLGK 559

  Fly   472 GGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSA----QRRIRAMMLSTNPP 532
            ||..|.|:::.||:.|::.:....|....:.:..|.|.|.|.:|:.|    ..|:|..:.|    
plant   560 GGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFS---- 620

  Fly   533 PITKKQKAAKEQLQQQQQSLAGAASSGSQQQQPQSPSQQQALPPQLHHQPVSSASSSSTPPAHHQ 597
                  .:.|..|.:...:|........|...|.|...         ||.||:.:::|: ..|.:
plant   621 ------NSMKNSLAKSSSALTTERFYDRQSDNPLSIGS---------HQSVSNPATNSS-SLHRR 669

  Fly   598 QQASTAATSH 607
            .:.|..:.||
plant   670 SEDSFLSGSH 679

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ImpNP_001245616.1 RRM2_VICKZ 42..118 CDD:409794 5/22 (23%)
KH-I_IGF2BP_rpt1 144..211 CDD:411828 22/93 (24%)
KH-I_IGF2BP_rpt2 231..302 CDD:411829 21/96 (22%)
KH-I_IGF2BP_rpt3 368..437 CDD:411830 19/76 (25%)
KH-I_IGF2BP_rpt4 455..523 CDD:411831 23/71 (32%)
HEN4NP_001190612.1 KH-I_PEPPER_rpt1_like 46..106 CDD:411887 19/62 (31%)
KH-I_PEPPER_rpt2_like 151..222 CDD:411888 19/71 (27%)
KH-I_PEPPER_rpt1_like 451..519 CDD:411887 19/73 (26%)
KH-I_PEPPER_rpt2_like 543..615 CDD:411888 23/71 (32%)
KH-I_HEN4_like_rpt5 787..852 CDD:411890
Blue background indicates that the domain is not in the aligned region.

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