DRSC/TRiP Functional Genomics Resources

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Protein Alignment Imp and AT5G46190

DIOPT Version :9

Sequence 1:NP_001245616.1 Gene:Imp / 32009 FlyBaseID:FBgn0285926 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_001330854.1 Gene:AT5G46190 / 834661 AraportID:AT5G46190 Length:689 Species:Arabidopsis thaliana


Alignment Length:632 Identity:140/632 - (22%)
Similarity:238/632 - (37%) Gaps:169/632 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 GSKLHAEQLDKNQRRSQRNQRNPYPGMPGPGRQADFP---------------LRILVQSEMVGAI 157
            |.:.|....| |...:.||||          |:..:.               .|||..|.::|::
plant     5 GKRTHNRFRD-NNNDNNRNQR----------RRLSYESEEKKIDNKDDLVVVYRILCPSGVMGSV 58

  Fly   158 IGRQGSTIRTITQQSRARVDVHRKENV----GSLEKSITIYGNPENCTNACKRILEVMQQEAIST 218
            ||:.|..|..|.|::|||:.|     |    |..|:.|||:     |:.:.|:       :.:..
plant    59 IGKSGKVINLIRQETRARIKV-----VDPFPGCSERVITIF-----CSVSEKK-------DIVDI 106

  Fly   219 NKGELS---PECS--EICLKI----------LAHNNLIGR-----------------IIGKSGNT 251
            ...||.   |.||  ...||:          .|.|..|.|                 :|||||:.
plant   107 EYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRECRLLVPSSQCSIVIGKSGSI 171

  Fly   252 IKRIMQDT--DTKITVSSINDIN---SFNLERIITVKGLIENMSRAENQISTKL-----RQSYEN 306
            ||.|...|  :.|:....::|.:   :.:.:.|:.:.|..|::.:|...:|..:     |:....
plant   172 IKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNIVMISGETESVKKALFAVSAIMYKVSPREQIPL 236

  Fly   307 DLQAM-APQSLMFP---------GLHP------------MAMMSTPGNGMVFNTSMPFPSCQSFA 349
            |.... .|.|::.|         ||:|            .:.:.|...|...|.:.|.|   .|:
plant   237 DTTVQEVPASIIIPSDLSIYPQAGLYPSQDSIFQHGANVSSFIGTLPQGYGENAANPVP---VFS 298

  Fly   350 MSKTPASVVPPVFPNDLQETTYLYI--PNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPL 412
            .|..|  ||.....:...|...:.:  .::.:|.:||..|..|:.|.:.|.:.:::.  |:....
plant   299 ASALP--VVHGFGGSSRSEKLAIKVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVN--DSRTNH 359

  Fly   413 DQQTERKVTIVGTPEG----QWKAQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGG 473
            |......||...:|:.    ..:|..::.||:.:|      |:.::.::|||:|..:|.||||.|
plant   360 DDDCVITVTATESPDDLKSMAVEAVLLLQEKINDE------DEDKVKMQLLVSSKVIGCIIGKSG 418

  Fly   474 QNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSA----QRRIRAMML------S 528
            ..:.|:::.|.:.|.:.:....|......:..|.|.|...:|:.|    ..|:|..:|      |
plant   419 SIISEIRKRTKADIHISKGNNTPKCADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRDRETGS 483

  Fly   529 TNPPPITKKQKAAKEQLQQQQQSLAGAASSGSQQQQPQS--PSQQQALPPQLHHQPVSSASSSST 591
            .|.||           .:.:..:...::||.:....|||  .|..|......:.:|.:.:|.|..
plant   484 RNQPP-----------ARSENNNFFSSSSSNTGLALPQSFMSSVPQVASVDFNRRPETGSSMSML 537

  Fly   592 P-----------PAHHQQQASTAATSHQLQQQQPSPPP-----PGNA 622
            |           |..:....|.::.|..|....|....     |.||
plant   538 PSSGGIYGYGSFPVGNTSYGSNSSYSSNLYGGLPQSTTMEVRIPANA 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ImpNP_001245616.1 RRM <37..>146 CDD:223796 9/52 (17%)
RRM2_VICKZ 42..118 CDD:240805 2/9 (22%)
KH-I 145..208 CDD:238053 23/66 (35%)
KH-I 232..296 CDD:238053 21/95 (22%)
KH-I 369..436 CDD:238053 13/72 (18%)
KH-I 455..522 CDD:238053 19/70 (27%)
AT5G46190NP_001330854.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D286875at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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