DRSC/TRiP Functional Genomics Resources

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Protein Alignment Imp and AT5G46190

DIOPT Version :10

Sequence 1:NP_001245616.1 Gene:Imp / 32009 FlyBaseID:FBgn0285926 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_001330854.1 Gene:AT5G46190 / 834661 AraportID:AT5G46190 Length:689 Species:Arabidopsis thaliana


Alignment Length:632 Identity:140/632 - (22%)
Similarity:238/632 - (37%) Gaps:169/632 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 GSKLHAEQLDKNQRRSQRNQRNPYPGMPGPGRQADFP---------------LRILVQSEMVGAI 157
            |.:.|....| |...:.||||          |:..:.               .|||..|.::|::
plant     5 GKRTHNRFRD-NNNDNNRNQR----------RRLSYESEEKKIDNKDDLVVVYRILCPSGVMGSV 58

  Fly   158 IGRQGSTIRTITQQSRARVDVHRKENV----GSLEKSITIYGNPENCTNACKRILEVMQQEAIST 218
            ||:.|..|..|.|::|||:.|     |    |..|:.|||:     |:.:.|:       :.:..
plant    59 IGKSGKVINLIRQETRARIKV-----VDPFPGCSERVITIF-----CSVSEKK-------DIVDI 106

  Fly   219 NKGELS---PECS--EICLKI----------LAHNNLIGR-----------------IIGKSGNT 251
            ...||.   |.||  ...||:          .|.|..|.|                 :|||||:.
plant   107 EYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRECRLLVPSSQCSIVIGKSGSI 171

  Fly   252 IKRIMQDT--DTKITVSSINDIN---SFNLERIITVKGLIENMSRAENQISTKL-----RQSYEN 306
            ||.|...|  :.|:....::|.:   :.:.:.|:.:.|..|::.:|...:|..:     |:....
plant   172 IKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNIVMISGETESVKKALFAVSAIMYKVSPREQIPL 236

  Fly   307 DLQAM-APQSLMFP---------GLHP------------MAMMSTPGNGMVFNTSMPFPSCQSFA 349
            |.... .|.|::.|         ||:|            .:.:.|...|...|.:.|.|   .|:
plant   237 DTTVQEVPASIIIPSDLSIYPQAGLYPSQDSIFQHGANVSSFIGTLPQGYGENAANPVP---VFS 298

  Fly   350 MSKTPASVVPPVFPNDLQETTYLYI--PNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPL 412
            .|..|  ||.....:...|...:.:  .::.:|.:||..|..|:.|.:.|.:.:::.  |:....
plant   299 ASALP--VVHGFGGSSRSEKLAIKVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVN--DSRTNH 359

  Fly   413 DQQTERKVTIVGTPEG----QWKAQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGG 473
            |......||...:|:.    ..:|..::.||:.:|      |:.::.::|||:|..:|.||||.|
plant   360 DDDCVITVTATESPDDLKSMAVEAVLLLQEKINDE------DEDKVKMQLLVSSKVIGCIIGKSG 418

  Fly   474 QNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSA----QRRIRAMML------S 528
            ..:.|:::.|.:.|.:.:....|......:..|.|.|...:|:.|    ..|:|..:|      |
plant   419 SIISEIRKRTKADIHISKGNNTPKCADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRDRETGS 483

  Fly   529 TNPPPITKKQKAAKEQLQQQQQSLAGAASSGSQQQQPQS--PSQQQALPPQLHHQPVSSASSSST 591
            .|.||           .:.:..:...::||.:....|||  .|..|......:.:|.:.:|.|..
plant   484 RNQPP-----------ARSENNNFFSSSSSNTGLALPQSFMSSVPQVASVDFNRRPETGSSMSML 537

  Fly   592 P-----------PAHHQQQASTAATSHQLQQQQPSPPP-----PGNA 622
            |           |..:....|.::.|..|....|....     |.||
plant   538 PSSGGIYGYGSFPVGNTSYGSNSSYSSNLYGGLPQSTTMEVRIPANA 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ImpNP_001245616.1 RRM2_VICKZ 42..118 CDD:409794 2/9 (22%)
KH-I_IGF2BP_rpt1 144..211 CDD:411828 23/85 (27%)
KH-I_IGF2BP_rpt2 231..302 CDD:411829 22/107 (21%)
KH-I_IGF2BP_rpt3 368..437 CDD:411830 14/74 (19%)
KH-I_IGF2BP_rpt4 455..523 CDD:411831 20/71 (28%)
AT5G46190NP_001330854.1 KH-I_PEPPER_rpt1_like 44..125 CDD:411887 28/97 (29%)
KH-I 151..223 CDD:469614 15/71 (21%)
KH-I_PEPPER_rpt1_like 316..385 CDD:411887 13/70 (19%)
KH-I_PEPPER_rpt2_like 403..472 CDD:411888 20/68 (29%)
KH-I 577..686 CDD:469614 3/8 (38%)

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