DRSC/TRiP Functional Genomics Resources

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Protein Alignment Imp and BTR1L

DIOPT Version :9

Sequence 1:NP_001245616.1 Gene:Imp / 32009 FlyBaseID:FBgn0285926 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_850764.1 Gene:BTR1L / 830322 AraportID:AT5G04430 Length:334 Species:Arabidopsis thaliana


Alignment Length:329 Identity:87/329 - (26%)
Similarity:152/329 - (46%) Gaps:35/329 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 QRNPYPGMPGPGRQADFP--LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV--GSL 187
            :|:|.|........|:.|  :|.||.:...|::||:.||||.....:|.||:.:.|.:..  |:.
plant    17 KRSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTT 81

  Fly   188 EKSITIYGNPENCTNACKRILEVMQQEAISTNKGELSPECSEICLKILAHNNLIGRIIGKSGNTI 252
            ::.|.|.|:.:...|..:.||:.:..|..:.:..|:.|...   ::::..|:..|.||||.|.||
plant    82 DRIIMISGSIKEVVNGLELILDKLHSELHAEDGNEVEPRRR---IRLVVPNSSCGGIIGKGGATI 143

  Fly   253 KRIMQDTDTKITVSSINDINSFN--LERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQS 315
            |..::::...|.:|.::  |:|.  .:|::|:.|..|...||.:.|..||.:.........:|.|
plant   144 KSFIEESKAGIKISPLD--NTFYGLSDRLVTLSGTFEEQMRAIDLILAKLTEDDHYSQNVHSPYS 206

  Fly   316 ---LMFPGLH--PMA----MMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTY 371
               |.:.|.|  |.|    .::|.|...|  ...|..|...:...|..||.           |..
plant   207 YAGLFYSGFHGPPYAYALPSVATAGYNSV--NYAPNGSGGKYQNHKEEAST-----------TVT 258

  Fly   372 LYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMI 436
            :.:.:..:|.::|..|.:|..|.:.:.|.:||:  |....:...|:|||:|.|......:|:.||
plant   259 IGVADEHIGLVLGRGGRNIMEITQMTGARIKIS--DRGDFMSGTTDRKVSITGPQRAIQQAETMI 321

  Fly   437 FEKM 440
            .:|:
plant   322 KQKV 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ImpNP_001245616.1 RRM <37..>146 CDD:223796 5/20 (25%)
RRM2_VICKZ 42..118 CDD:240805
KH-I 145..208 CDD:238053 19/64 (30%)
KH-I 232..296 CDD:238053 20/65 (31%)
KH-I 369..436 CDD:238053 17/66 (26%)
KH-I 455..522 CDD:238053
BTR1LNP_850764.1 KH-I_BTR1_rpt1 34..106 CDD:411941 22/71 (31%)
KH-I_BTR1_rpt2 123..191 CDD:411865 21/69 (30%)
KH-I_BTR1_rpt3 255..325 CDD:411942 19/82 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10288
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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