DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Imp and FLK

DIOPT Version :9

Sequence 1:NP_001245616.1 Gene:Imp / 32009 FlyBaseID:FBgn0285926 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_001325772.1 Gene:FLK / 819619 AraportID:AT3G04610 Length:577 Species:Arabidopsis thaliana


Alignment Length:602 Identity:136/602 - (22%)
Similarity:215/602 - (35%) Gaps:183/602 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 QIFDPPLDRQQLEGAGTSSVTTSKILISGIPMQTRFEDIEPLLKPYGIVKQCE------------ 72
            ::.||.|:.||.|                :|.||    :||  :.|.:..|.|            
plant    57 EVPDPTLEPQQYE----------------VPDQT----LEP--QQYEVDDQLEYHQYQLQDQANE 99

  Fly    73 --------AISSKDQNTQTVHITFENPEQAQRAAVG----LNGVEF-------EGSKLHAEQLDK 118
                    .:..:.||.:...:..|..:|||..|.|    .||.|.       ||...|.|.|.|
plant   100 DVQDHSQDDLQYQPQNQEQFQLQDEAHDQAQYQAQGDVQDHNGDEVQDKVEDEEGIPEHLESLQK 164

  Fly   119 NQRRSQR---NQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHR 180
            ::.....   .:...:||.||     :...|:||.::.||:||||:|..|:.|.:::|||:.: .
plant   165 SEPEEDATVGGEEKRWPGWPG-----ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKI-L 223

  Fly   181 KENVGSLEKSITIYGNPE----------NCTNACKRILEVMQQEAISTNKGELSPECSEICLKIL 235
            ....|:.|:::.:.|..|          .......||::.:..||      ..:|..|::..::|
plant   224 DGPPGTTERAVMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEA------SQAPPPSKVSTRLL 282

  Fly   236 AHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGLIENMSRAENQIST 298
            ...:..|.:|||.|.|:|.|.:.:...:.|....|:..|.|  :|::.|.|...::.||...|::
plant   283 VPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIAS 347

  Fly   299 KLRQ---------SYENDLQAMAPQSLMFPGLH-----PMAMMSTPGNGMVFNTSMPF------- 342
            .||:         .:||.:|....|....|..|     |.....:.|.|...:...|:       
plant   348 HLRKFLVDRSIIPFFENQMQKPTRQMDHMPPPHQSWGPPQGHAPSVGGGGYGHNPPPYMQPPPRH 412

  Fly   343 ------PSCQSFAMSKTP----------------ASVVPPVFPNDLQETTYLYIPNNAVGAIIGT 385
                  |..:...|.|.|                .|..||:...  |.|..:.||.:...|:|||
plant   413 DSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSSAPPMVAQ--QVTQQMQIPLSYADAVIGT 475

  Fly   386 RGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMIFEKMREEGFMCGTD 450
            .||:|....|.|.|::.|          |:|.      |.| |:                     
plant   476 SGSNISYTRRLSGATVTI----------QETR------GVP-GE--------------------- 502

  Fly   451 DVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLFYSV 515
               :|||:....|||...:    |.::......|:........:||...|......|  |..|:.
plant   503 ---MTVEVSGTGSQVQTAV----QLIQNFMAEAGAPAPAQPQTVAPEQQGYNPYATH--GSVYAA 558

  Fly   516 QSAQRRIRAMMLSTNPP 532
                       ..||||
plant   559 -----------APTNPP 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ImpNP_001245616.1 RRM <37..>146 CDD:223796 29/142 (20%)
RRM2_VICKZ 42..118 CDD:240805 24/106 (23%)
KH-I 145..208 CDD:238053 20/72 (28%)
KH-I 232..296 CDD:238053 18/65 (28%)
KH-I 369..436 CDD:238053 19/66 (29%)
KH-I 455..522 CDD:238053 14/66 (21%)
FLKNP_001325772.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm3056
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X348
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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