Protein Alignment Imp and Fubp1

DIOPT Version :9

• Sequence 1: NP_001245616.1
• Gene: Imp / 32009
• FlyBaseID: FBgn0285926
• Length: 638
• Species: Drosophila melanogaster
• Sequence 2: XP_038959028.1
• Gene: Fubp1 / 654496
• RGDID: 1591892
• Length: 697
• Species: Rattus norvegicus
• Alignment Length: 581
• Identity: 123/581 - (21%)
• Similarity: 201/581 - (34%)
• Gaps: 162/581 - (27%)

  Fly   129 NP-----YPGMPGPGRQADFPLRILVQSE---------------------------MVGAIIGRQ 161
            ||     :.|||.|.:......::..|::                           |||.||||.
  Rat    72 NPSSTTHWEGMPSPFKDQPDAKKVPPQNDSFGAQLPPMHQQQSRSVMTEEYKVPDGMVGFIIGRG 136

  Fly   162 GSTIRTITQQSRARVDVHRKENVGSLEKSITIYGNPENCTNACKRILEVMQQEAISTNKGELSPE 226
            |..|..|.|:|..::.: ..::.|..|:|..:.|.||:..:| ||:|:.:      ..||..:|.
  Rat   137 GEQISRIQQESGCKIQI-APDSGGLPERSCMLTGTPESVQSA-KRLLDQI------VEKGRPAPG 193

  Fly   227 C------SEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNLERIITVKGL 285
            .      .....:|:...:..|.:|||.|.|||::.:....|:.:......|: ..::.:.:.|
  Rat   194 FHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNT-GADKPLRITG- 256

  Fly   286 IENMSRAENQISTKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTPGNGMVFNTSMPFPSCQSFAM 350
                      ...|::|:.|..|:.:..|.    |..  .:.:..|:.:..|..:..|
  Rat   257 ----------DPYKVQQAKEMVLELIRDQG----GFR--EVRNEYGSRIGGNEGIDVP------- 298

  Fly   351 SKTPASVVPPVFPNDLQETTYLYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQ 415
                                   ||..|||.:||..|..|:.|...:...::..|.|...|
  Rat   299 -----------------------IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTP---- 336

  Fly   416 TERKVTIVGTPEGQWKAQYMIFEKMR--------------------EEGFMCGTDDVRLTVELLV 460
             :|...|.|.|:....|..:|.:.:|                    :..:..|..........:|
  Rat   337 -DRIAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIV 400

  Fly   461 ASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEE--------TPVHIIGLFYSVQS 517
            .:.:.|.||||||:.::.:.:.:|:.|:|..:   ||...|..        ||..|   .|:.|.
  Rat   401 PTGKTGLIIGKGGETIKSISQQSGARIELQRN---PPPNADPNMKLFTIRGTPQQI---DYARQL 459

  Fly   518 AQRRIRAMMLSTNP--PPITKKQKAAKEQLQQQQQSLAGAASSGSQQQQPQSPSQQQALPPQLHH 580
            .:.:|..   ..||  ||:.......     .......|....|: ...|.:|:.....||
  Rat   460 IEEKIGG---PVNPLGPPVPHGPHGV-----PGPHGPPGPPGPGT-PMGPYNPAPYNPGPP---- 511

  Fly   581 QPVSSASSSSTPPAHHQQQASTAATSHQLQQQQPSPPPPG---NATAAAA------QQQQQ 632
                 ..:...|||.:..|....|..|..||..|.|...|   |:.|.||      |||.|
  Rat   512 -----GPAPHGPPAPYAPQGWGNAYPHWQQQAPPDPAKAGTDPNSAAWAAYYAHYYQQQAQ 567

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Imp	NP_001245616.1	RRM	<37..>146	CDD:223796	6/21 (29%)
		RRM2_VICKZ	42..118	CDD:240805
		KH-I	145..208	CDD:238053	22/89 (25%)
		KH-I	232..296	CDD:238053	12/63 (19%)
		KH-I	369..436	CDD:238053	18/66 (27%)
		KH-I	455..522	CDD:238053	19/74 (26%)
Fubp1	XP_038959028.1	KH-I_FUBP1_rpt1	115..189	CDD:411906	23/81 (28%)
		KH-I_FUBP1_rpt2	203..272	CDD:411909	16/80 (20%)
		KH-I_FUBP1_rpt3	293..360	CDD:411912	20/101 (20%)
		KH-I_FUBP1_rpt4	393..464	CDD:411915	19/76 (25%)
		DUF1897	628..>642	CDD:401086

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166335346
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840