Sequence 1: | NP_001245616.1 | Gene: | Imp / 32009 | FlyBaseID: | FBgn0285926 | Length: | 638 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001262415.1 | Gene: | ps / 44258 | FlyBaseID: | FBgn0261552 | Length: | 780 | Species: | Drosophila melanogaster |
Alignment Length: | 544 | Identity: | 114/544 - (20%) |
---|---|---|---|
Similarity: | 171/544 - (31%) | Gaps: | 201/544 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 71 CEAISSKDQNTQ---------TVHITFENPEQAQRAAVGLNGVEFEGSKLHAEQLDKNQRRSQRN 126
Fly 127 QRNPYPG-------MPG--------------------------------PGRQADFPLRILVQSE 152
Fly 153 MVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSL-EKSITIYGNPENCTNACKRILE------- 209
Fly 210 --------------------------VMQQEAI-------------------------------- 216
Fly 217 -STNKGELSPE--------------------------CSEI--CLKILAHNNLIGRIIGKS---- 248
Fly 249 -----GNTIKRIMQDTDTKITVSSINDINSF------NLERIITVKGLIENMSRAENQISTKLRQ 302
Fly 303 SYENDLQAMAPQ--------SLMFPGLHPMAMMSTPGNGMVFN---TSMPFPSCQSFAMSKTPAS 356
Fly 357 VVPPVFPNDL--QETTYLYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERK 419
Fly 420 VTIVGTPEGQWKAQYMIFEKMREE 443 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Imp | NP_001245616.1 | RRM | <37..>146 | CDD:223796 | 18/122 (15%) |
RRM2_VICKZ | 42..118 | CDD:240805 | 11/55 (20%) | ||
KH-I | 145..208 | CDD:238053 | 26/63 (41%) | ||
KH-I | 232..296 | CDD:238053 | 18/78 (23%) | ||
KH-I | 369..436 | CDD:238053 | 21/66 (32%) | ||
KH-I | 455..522 | CDD:238053 | |||
ps | NP_001262415.1 | PCBP_like_KH | 275..340 | CDD:239089 | 13/69 (19%) |
PCBP_like_KH | 368..433 | CDD:239089 | 26/64 (41%) | ||
KH-I | 696..759 | CDD:238053 | 21/64 (33%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45439331 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR10288 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |