Sequence 1: | NP_001245616.1 | Gene: | Imp / 32009 | FlyBaseID: | FBgn0285926 | Length: | 638 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009294752.1 | Gene: | pcbp4 / 406391 | ZFINID: | ZDB-GENE-040426-2122 | Length: | 463 | Species: | Danio rerio |
Alignment Length: | 521 | Identity: | 119/521 - (22%) |
---|---|---|---|
Similarity: | 205/521 - (39%) | Gaps: | 140/521 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 134 MPGP---------------GRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKEN 183
Fly 184 VGSL-EKSITIYGNPENCTNACKRILEVMQQE--AISTNKGELSPECSEICLKILAHNNLIGRII 245
Fly 246 GKSGNTIKRIMQDTDTKITVSSINDINSFNLERIITVKG---------------LIENMSR---- 291
Fly 292 -------------AENQI-----------------STKLRQSYENDLQAMAPQSLMFPGLHPMAM 326
Fly 327 MSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTYLYIPNNAVGAIIGTRGSHIR 391
Fly 392 SIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMIFEKMREEGFMCGTDDVRLTV 456
Fly 457 ELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPS----------GGDEETPVHIIGL 511
Fly 512 FYSVQ-SAQRRIRAM-MLSTNPPPITKKQKAAKEQLQQQQQSLAGAASSGSQQQQPQSPSQQQAL 574
Fly 575 P 575 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Imp | NP_001245616.1 | RRM | <37..>146 | CDD:223796 | 4/26 (15%) |
RRM2_VICKZ | 42..118 | CDD:240805 | |||
KH-I | 145..208 | CDD:238053 | 23/63 (37%) | ||
KH-I | 232..296 | CDD:238053 | 19/95 (20%) | ||
KH-I | 369..436 | CDD:238053 | 26/66 (39%) | ||
KH-I | 455..522 | CDD:238053 | 13/77 (17%) | ||
pcbp4 | XP_009294752.1 | PCBP_like_KH | 28..89 | CDD:239089 | 23/64 (36%) |
PCBP_like_KH | 112..176 | CDD:239089 | 16/65 (25%) | ||
KH-I | 280..342 | CDD:238053 | 26/66 (39%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170574652 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |