DRSC/TRiP Functional Genomics Resources

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Protein Alignment Imp and Psi

DIOPT Version :10

Sequence 1:NP_001245616.1 Gene:Imp / 32009 FlyBaseID:FBgn0285926 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_995862.1 Gene:Psi / 36889 FlyBaseID:FBgn0014870 Length:797 Species:Drosophila melanogaster


Alignment Length:72 Identity:20/72 - (27%)
Similarity:30/72 - (41%) Gaps:4/72 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 DENPSILPVPVPNL---SGLMKRLQTTLAKKLEVSSREYDPPIRTTTPEYFPPVTATIVRAEGPI 140
            :..|.::...|.|:   |||..::...:|.||.||. .|.||...|......|..:|........
  Fly   224 ESKPFVMVRTVGNVTRYSGLEVKIFNHIAAKLNVSI-VYTPPPNNTRWGVLLPHNSTGQMGMLQR 287

  Fly   141 NQRPIGF 147
            |:..:||
  Fly   288 NEADVGF 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ImpNP_001245616.1 RRM2_VICKZ 42..118 CDD:409794 13/41 (32%)
KH-I_IGF2BP_rpt1 144..211 CDD:411828 2/4 (50%)
KH-I_IGF2BP_rpt2 231..302 CDD:411829
KH-I_IGF2BP_rpt3 368..437 CDD:411830
KH-I_IGF2BP_rpt4 455..523 CDD:411831
PsiNP_995862.1 KH_1 123..184 CDD:459630
KH-I_FUBP_rpt2 214..280 CDD:411825 16/56 (29%)
KH-I_FUBP_rpt3 317..384 CDD:411826
KH-I_FUBP_rpt4 428..494 CDD:411827
DUF1897 591..619 CDD:462653
DUF1897 <653..680 CDD:462653
Blue background indicates that the domain is not in the aligned region.

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