DRSC/TRiP Functional Genomics Resources

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Protein Alignment Imp and pcbp2

DIOPT Version :10

Sequence 1:NP_001245616.1 Gene:Imp / 32009 FlyBaseID:FBgn0285926 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_957486.1 Gene:pcbp2 / 321844 ZFINID:ZDB-GENE-030131-563 Length:318 Species:Danio rerio


Alignment Length:333 Identity:85/333 - (25%)
Similarity:153/333 - (45%) Gaps:57/333 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 GRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSL-EKSITIYGNPENCT 201
            |......:|:|:..:.||:|||::|.:::.:.::|.||:::    :.|:. |:.||:.|......
Zfish     9 GLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGNCPERIITLAGPTTAIF 69

  Fly   202 NACKRILEVMQQEAISTNKGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVS 266
            .|...|:|.::::..|:.....:.....:.|:|:...:..|.:|||.|..||.|.:.|..::.|:
Zfish    70 KAFSMIIEKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA 134

  Fly   267 SINDINSFNLERIITVKGLIENMSRAENQISTKLRQSYENDL------------------QAMAP 313
              .|:...:.||.||:.|...::.....||...:.:|....:                  ||.|.
Zfish   135 --GDMLPNSTERAITIAGTPLSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAV 197

  Fly   314 Q---SLMFPG---LHPMAMMSTPGNGMVFNTSMPF-PSCQSFAMSKTPASVVPPVFPNDLQETTY 371
            |   ::..|.   ||.:||..:|         .|. ||.|.|......::          |..::
Zfish   198 QGQHAIPQPDLTKLHQLAMQQSP---------FPLAPSSQGFTAGMDASA----------QTGSH 243

  Fly   372 -LYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYM 435
             |.|||:.:|.|||.:|:.|..|.:.|.|.:|||     .|::..::|:|||.|:|.....|:|:
Zfish   244 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA-----NPVEGSSDRQVTITGSPASISLAEYL 303

  Fly   436 IFEKMREE 443
            |..::..|
Zfish   304 INARLSSE 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ImpNP_001245616.1 RRM2_VICKZ 42..118 CDD:409794
KH-I_IGF2BP_rpt1 144..211 CDD:411828 19/67 (28%)
KH-I_IGF2BP_rpt2 231..302 CDD:411829 20/70 (29%)
KH-I_IGF2BP_rpt3 368..437 CDD:411830 25/69 (36%)
KH-I_IGF2BP_rpt4 455..523 CDD:411831
pcbp2NP_957486.1 KH-I_PCBP1_2_rpt1 13..82 CDD:411943 19/72 (26%)
KH-I 93..171 CDD:469614 21/79 (27%)
KH-I_PCBP1_2_rpt3 237..312 CDD:411949 28/90 (31%)
Blue background indicates that the domain is not in the aligned region.

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