DRSC/TRiP Functional Genomics Resources

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Protein Alignment Imp and Igf2bp3

DIOPT Version :9

Sequence 1:NP_001245616.1 Gene:Imp / 32009 FlyBaseID:FBgn0285926 Length:638 Species:Drosophila melanogaster
Sequence 2:XP_038963480.1 Gene:Igf2bp3 / 312320 RGDID:1306512 Length:628 Species:Rattus norvegicus


Alignment Length:595 Identity:216/595 - (36%)
Similarity:314/595 - (52%) Gaps:130/595 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KILISGIPMQTRFEDIEPLLKPYGIVKQCEAISSKDQNTQTVHITFENPEQAQRAAVGLNGVEFE 107
            |:.|..||...::|.::.||..||:|:.||.::: |..|..|::|:.:.:||::|...|||.:.|
  Rat    82 KLQIRNIPPHLQWEVLDSLLVQYGVVESCEQVNT-DSETAVVNVTYSSKDQARQALDKLNGFQLE 145

  Fly   108 GSKLH---------AEQLDKNQRRSQRNQRNPYPGMPGPGRQ-----------ADFPLRILVQSE 152
            ...|.         |:|....|.|.:|.     ||..|..||           .|.|||:||.::
  Rat   146 NFTLKVAYIPDETAAQQSPSPQLRGRRG-----PGQRGSSRQTSPGSVSKQKPCDLPLRLLVPTQ 205

  Fly   153 MVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYGNPENCTNACKRILEVMQQEAIS 217
            .||||||::|:|||.||:|:::::|||||||.|:.||||||...||..:.|||.|||:|.:||..
  Rat   206 FVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILSTPEGTSAACKSILEIMHKEAQD 270

  Fly   218 TNKGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNLERIITV 282
            ....|      ||.||||||||.:||:|||.|..:|:|.||||||||:|.:.::..:|.||.|||
  Rat   271 IKFTE------EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITV 329

  Fly   283 KGLIENMSRAENQISTKLRQSYENDLQAM------------------------------------ 311
            ||.:|..::||.:|..|:|:|||||:.:|                                    
  Rat   330 KGNVETCAKAEEEIMKKIRESYENDIASMNGLYHPLLASVSTGCTWRAAIQATGTSIHMYLRDKY 394

  Fly   312 -----------AP--QSLMFPGLHPMAM-MSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPV- 361
                       .|  |:.:.|||:..|: :..|.:||...||.|            |:::.||. 
  Rat   395 TDTVFPRGSCILPKLQAHLIPGLNLNALGLFPPTSGMPPPTSGP------------PSAMTPPYP 447

  Fly   362 -FPNDLQETTYLYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 425
             |.....||.:|:||..:||||||.:|.||:.:.||:.||:||||.:|.   |.:. |.|.|.|.
  Rat   448 QFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAP---DAKV-RMVIITGP 508

  Fly   426 PEGQWKAQYMIFEKMREEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLP 490
            ||.|:|||..|:.|::||.|:...::|:|...:.|.|...||:|||||:.|.|||.::.:.:.:|
  Rat   509 PEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVP 573

  Fly   491 EHALAPPSGGDEETP-------VHIIGLFYSVQSAQRRIRAMMLSTNPPPITKKQKAAKEQLQQQ 548
            .          ::||       |.|.|.||:.|.|||:|:.::...             :|.|||
  Rat   574 R----------DQTPDENDQVVVKITGHFYACQVAQRKIQEILTQV-------------KQHQQQ 615

  Fly   549 QQSLAGAASS 558
            :...:||..|
  Rat   616 KALQSGAPQS 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ImpNP_001245616.1 RRM <37..>146 CDD:223796 36/122 (30%)
RRM2_VICKZ 42..118 CDD:240805 26/83 (31%)
KH-I 145..208 CDD:238053 36/62 (58%)
KH-I 232..296 CDD:238053 36/63 (57%)
KH-I 369..436 CDD:238053 33/66 (50%)
KH-I 455..522 CDD:238053 25/73 (34%)
Igf2bp3XP_038963480.1 RRM_SF 1..77 CDD:418427
RRM2_IGF2BP3 81..156 CDD:410039 24/74 (32%)
KH-I_IGF2BP3_rpt1 197..272 CDD:411920 43/74 (58%)
KH-I 275..359 CDD:412160 47/89 (53%)
KH-I_IGF2BP3_rpt3 451..528 CDD:411926 38/80 (48%)
KH-I_IGF2BP1_rpt4 536..611 CDD:411927 27/97 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335348
Domainoid 1 1.000 86 1.000 Domainoid score I7895
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 363 1.000 Inparanoid score I2109
OMA 1 1.010 - - QHG45563
OrthoDB 1 1.010 - - D428942at33208
OrthoFinder 1 1.000 - - FOG0001972
OrthoInspector 1 1.000 - - otm44382
orthoMCL 1 0.900 - - OOG6_103496
Panther 1 1.100 - - LDO PTHR10288
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X348
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.910

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