DRSC/TRiP Functional Genomics Resources

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Protein Alignment Imp and Khsrp

DIOPT Version :10

Sequence 1:NP_001245616.1 Gene:Imp / 32009 FlyBaseID:FBgn0285926 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_001382025.1 Gene:Khsrp / 171137 RGDID:621828 Length:748 Species:Rattus norvegicus


Alignment Length:592 Identity:124/592 - (20%)
Similarity:208/592 - (35%) Gaps:158/592 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 FEGSKLHAEQLDKNQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSE------MVGAIIGRQGST 164
            |.|.|...|..|:...:...:|.:......||...   |.|..:..|      |||.||||.|..
  Rat   106 FGGQKRQLEDGDQPDSKKLASQGDSIGSQLGPIHP---PPRTSMTEEYRVPDGMVGLIIGRGGEQ 167

  Fly   165 IRTITQQSRARVDVHRKENVGSLEKSITIYGNPENCTNACKRILEVMQQEAISTNKGELSPECSE 229
            |..|.|.|..:|.: ..::.|..|:|:::.|.||:...|     ::|..:.:|..:|....:..:
  Rat   168 INKIQQDSGCKVQI-SPDSGGLPERSVSLTGAPESVQKA-----KMMLDDIVSRGRGGPPGQFHD 226

  Fly   230 --------ICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNLERIITVKGLI 286
                    ...:|:......|.:|||.|.|||::.:....|:.:......|: |:::.:.:.|..
  Rat   227 NANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNT-NVDKPLRIIGDP 290

  Fly   287 ENMSRAENQISTKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTPGNGMVFNTSMPFPSCQSFAMS 351
            ..:.:|...:...||   |.|......::         ...|..|.|:                 
  Rat   291 YKVQQACEMVMDILR---ERDQGGFGDRN---------EYGSRVGGGI----------------- 326

  Fly   352 KTPASVVPPVFPNDLQETTYLYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQT 416
                 .||              :|.::||.:||..|..|:.|...:...::....|...|     
  Rat   327 -----DVP--------------VPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP----- 367

  Fly   417 ERKVTIVGTPEGQWKAQYMIFEKM------------------------REEGFMCGTDDVRLTVE 457
            |:...|:|.|:....|..:|.:.:                        |.:| ..|.....:|..
  Rat   368 EKIAHIMGPPDRCEHAARIINDLLQSLRSGPPGPPGAPGMPPGGRGRGRGQG-NWGPPGGEMTFS 431

  Fly   458 LLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHII-----GLFYSVQS 517
              :.:.:.|.:||:||:||:.:.:.||:.:::....   |..||....:.:|     .:.::.|.
  Rat   432 --IPTHKCGLVIGRGGENVKAINQQTGAFVEISRQL---PPNGDPNFKLFVIRGSPQQIDHAKQL 491

  Fly   518 AQRRIRAMMLSTNPPPITKKQKAAKEQLQQQQQSLAGAASSGS---------QQQQPQSPSQQQA 573
            .:.:|...:....|.|                   .|...:|.         .|..|.:|.....
  Rat   492 IEEKIEGPLCPVGPGP-------------------GGPGPAGPMGPFNPGPFNQGPPGAPPHAGG 537

  Fly   574 LPPQLHHQPVSSASSSS---TPPA-HHQQQASTAAT----------SHQLQQQQPSPPPPGNATA 624
            .||  |..|.....::.   .||| |...:|:.|||          ||  ..|||..|.||.|.|
  Rat   538 PPP--HQYPPQGWGNTYPQWQPPAPHDPNKAAAAATDPNAAWAAYYSH--YYQQPPGPVPGPAPA 598

  Fly   625 AAAQQQQ 631
            .||...|
  Rat   599 PAAPPAQ 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ImpNP_001245616.1 RRM2_VICKZ 42..118 CDD:409794 4/11 (36%)
KH-I_IGF2BP_rpt1 144..211 CDD:411828 23/72 (32%)
KH-I_IGF2BP_rpt2 231..302 CDD:411829 15/70 (21%)
KH-I_IGF2BP_rpt3 368..437 CDD:411830 15/68 (22%)
KH-I_IGF2BP_rpt4 455..523 CDD:411831 15/72 (21%)
KhsrpNP_001382025.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..148 10/44 (23%)
KH-I_FUBP2_rpt1 146..216 CDD:411907 23/75 (31%)
KH-I_FUBP2_rpt2 234..306 CDD:411910 16/75 (21%)
KH-I_FUBP2_rpt3 324..391 CDD:411913 19/107 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 394..422 2/28 (7%)
KH-I_FUBP2_rpt4 427..495 CDD:411916 15/72 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 498..570 16/92 (17%)
4 X 12 AA imperfect repeats 572..685 13/36 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 588..650 9/18 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 659..678
DUF1897 672..>686 CDD:462653
Blue background indicates that the domain is not in the aligned region.

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