DRSC/TRiP Functional Genomics Resources

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Protein Alignment Imp and igf2bp2a

DIOPT Version :9

Sequence 1:NP_001245616.1 Gene:Imp / 32009 FlyBaseID:FBgn0285926 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_001108030.2 Gene:igf2bp2a / 100136839 ZFINID:ZDB-GENE-070912-44 Length:607 Species:Danio rerio


Alignment Length:579 Identity:219/579 - (37%)
Similarity:314/579 - (54%) Gaps:109/579 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KILISGIPMQTRFEDIEPLLKPYGIVKQCEAISSKDQNTQTVHITFENPEQAQRAAVGLNGVEFE 107
            ||.|..||...::|.::.||..||.|:..|.::: |..|..|::|:...|:|:.|...|....||
Zfish    82 KIQIRNIPPHLQWEVLDSLLAQYGTVENVEQVNT-DTETAVVNVTYSTKEEAKVAVEKLIEQTFE 145

  Fly   108 GSKLHAEQL-----------DKNQR--RSQRNQRNPYPGMPGPG-----RQADFPLRILVQSEMV 154
            ........:           .:|:|  |:.|.| :..||..|..     :|.|||||:||.::.|
Zfish   146 DYSFKVSYIMDMDAAAALPGTRNRRGGRTSREQ-DSQPGTSGSSLGSRQKQPDFPLRMLVPTQFV 209

  Fly   155 GAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYGNPENCTNACKRILEVMQQEAISTN 219
            |||||::|.||:.||:|::::||:|||||.|:.||.|||:..||.|:.||..|:::||:||:.|.
Zfish   210 GAIIGKEGLTIKNITKQTQSKVDIHRKENAGAAEKPITIHSTPEGCSTACHMIMDIMQKEAVDTK 274

  Fly   220 KGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNLERIITVKG 284
            ..|      :|.|||||||:|:||:|||.|..:|:|.:||:||||:||:.|:..:|.||.|.|||
Zfish   275 VTE------DIPLKILAHNSLVGRLIGKEGRNLKKIEEDTETKITISSLQDLTIYNPERTIIVKG 333

  Fly   285 LIENMSRAENQISTKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTPGNGMVFNTSMPFPSCQSFA 349
            .||...|||.:|..|||::||||:.|:..||.:.|||    .:|..|   :|:|          .
Zfish   334 SIEACCRAEVEIMKKLREAYENDVAAINQQSNLIPGL----SLSALG---IFST----------G 381

  Fly   350 MSKTPASV----VPPVFPNDL-------------------------------QETTYLYIPNNAV 379
            :|..|.:.    :|||.|...                               ||..||:||..||
Zfish   382 LSVLPPAAGPRGIPPVPPTGYNPFLGHSSQLGGLYGVPPASGISHQHTQAPEQEVVYLFIPTQAV 446

  Fly   380 GAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMIFEKMREEG 444
            |||||.:|.||:.:.||:.||:||||  |:.|  ..|:|.|.|.|.||.|:|||..||.|::||.
Zfish   447 GAIIGKKGQHIKQLARFAGASIKIAP--AESP--DVTQRMVIITGPPEAQFKAQGRIFGKLKEEN 507

  Fly   445 FMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHII 509
            |....::|:|...:.|.||..||:|||||:.|.|||.:|.:.:.:|..  ..|...| |..|.|.
Zfish   508 FFTAKEEVKLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVIVPRD--QTPDEND-EVFVKIS 569

  Fly   510 GLFYSVQSAQRRIRAMMLSTNPPPITKKQKAAKEQLQQQQQSLAGAASSGSQQQQPQSP 568
            |.|::.|:|||:||.::                :|::||:|.        .||..|.:|
Zfish   570 GHFFASQTAQRKIREII----------------QQVKQQEQK--------HQQGAPTTP 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ImpNP_001245616.1 RRM <37..>146 CDD:223796 34/120 (28%)
RRM2_VICKZ 42..118 CDD:240805 22/85 (26%)
KH-I 145..208 CDD:238053 34/62 (55%)
KH-I 232..296 CDD:238053 37/63 (59%)
KH-I 369..436 CDD:238053 35/66 (53%)
KH-I 455..522 CDD:238053 27/66 (41%)
igf2bp2aNP_001108030.2 RRM1_IGF2BP2 1..77 CDD:241070
RRM <2..>77 CDD:223796
RRM_SF 81..156 CDD:302621 22/74 (30%)
KH-I 200..263 CDD:238053 34/62 (55%)
KH-I 281..346 CDD:238053 37/64 (58%)
COG4020 <314..385 CDD:304975 34/87 (39%)
PCBP_like_KH 439..500 CDD:239089 34/64 (53%)
KH-I 518..582 CDD:238053 27/66 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574650
Domainoid 1 1.000 85 1.000 Domainoid score I8118
eggNOG 1 0.900 - - E1_KOG2193
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 357 1.000 Inparanoid score I2190
OMA 1 1.010 - - QHG45563
OrthoDB 1 1.010 - - D286875at2759
OrthoFinder 1 1.000 - - FOG0001972
OrthoInspector 1 1.000 - - otm24525
orthoMCL 1 0.900 - - OOG6_103496
Panther 1 1.100 - - O PTHR10288
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4013
SonicParanoid 1 1.000 - - X348
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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