DRSC/TRiP Functional Genomics Resources

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Protein Alignment sesB and GC2

DIOPT Version :10

Sequence 1:NP_727448.1 Gene:sesB / 32007 FlyBaseID:FBgn0003360 Length:312 Species:Drosophila melanogaster
Sequence 2:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster


Alignment Length:297 Identity:75/297 - (25%)
Similarity:122/297 - (41%) Gaps:67/297 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 GGISAAVSKTAVAPIERVKLLLQVQHISKQISPDKQYKGMVDCFIRIPKEQGFSSFWRGNLANVI 94
            ||::..:....|.|::.||..||.|.|..  :.::.|..:.|||.:....:|:...:||:..|::
  Fly    27 GGVAGIIGVACVYPLDMVKTRLQNQTIGP--NGERMYTSIADCFRKTIASEGYFGMYRGSAVNIV 89

  Fly    95 RYFPTQALNFAFKDKYKQVFLGGVDKNTQFWRYFAGNLAS-------------GGAAGATSLCFV 146
            ...|.:|:.....|               |:||   :|||             ||.||...:...
  Fly    90 LITPEKAIKLTAND---------------FFRY---HLASDDGVIPLSRATLAGGLAGLFQIVVT 136

  Fly   147 YPLDFARTRL-------AADTGKGGQ-REFTGLGNCLTK-IFKSDGIVGLYRGFGVSVQGIIIYR 202
            .|::..:.::       |||...|.: :..|.||  ||| :.:..||.|||:|.|.:....|.:.
  Fly   137 TPMELLKIQMQDAGRVAAADRAAGREVKTITALG--LTKTLLRERGIFGLYKGVGATGVRDITFS 199

  Fly   203 AAYFGFYDTARGMLP---DPKNTPIYISWAIAQVVTTVAGIVS--------YPFDTVRRRMMMQS 256
            ..||..........|   |.....::. |::      :||::|        .|||.|:.|:....
  Fly   200 MVYFPLMAWINDQGPRKSDGSGEAVFY-WSL------IAGLLSGMTSAFMVTPFDVVKTRLQADG 257

  Fly   257 GRKATEVIYKNTLHCWATIAKQEGTGAFFKGAFSNIL 293
            .:|     :|..:.|.....|:||..|||||....|:
  Fly   258 EKK-----FKGIMDCVNRTLKEEGISAFFKGGLCRIM 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sesBNP_727448.1 PTZ00169 23..312 CDD:240302 75/297 (25%)
GC2NP_731657.2 Mito_carr 16..106 CDD:395101 22/95 (23%)
Mito_carr 123..203 CDD:395101 23/81 (28%)
Mito_carr 228..302 CDD:395101 20/73 (27%)

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