DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stx and Midn

DIOPT Version :9

Sequence 1:NP_001259426.1 Gene:stx / 32005 FlyBaseID:FBgn0052676 Length:1122 Species:Drosophila melanogaster
Sequence 2:NP_067540.1 Gene:Midn / 59090 MGIID:1890222 Length:508 Species:Mus musculus


Alignment Length:1024 Identity:195/1024 - (19%)
Similarity:270/1024 - (26%) Gaps:616/1024 - (60%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 LATTTSAVVASPMTINLNISTTTGGNFGVSVEPHISVESLKKIIAKKLKVAKDRICLLHREKELQ 119
            |.|.|.:  |:||  :|.|.:|||..:.:||....:||.|:|.::::|||.|:|:.|||::..|.
Mouse    22 LNTATES--AAPM--SLAIHSTTGTRYDLSVPHDETVEGLRKRLSQRLKVPKERLALLHKDTRLS 82

  Fly   120 DGTLRDHNLMDGSKIILIPNVETGLLAQ--RPENTVMQALESLNDA------------------- 163
            .|.|::..:.||||:.|:|.||.||::|  |||.:||||||||.:.                   
Mouse    83 SGKLQEFGVGDGSKLTLVPTVEAGLMSQASRPEQSVMQALESLTETQPPATPGPGRAAGGGFRKY 147

  Fly   164 ------------------------QVNDFLSGKTPLNLSMRLGDHMMLIQLQLSTVNPAGGGAAT 204
                                    ||:|||||::||.|::|:|||||.:||||         ||.
Mouse   148 RLILFKRPWHRQGPQSPERGGERPQVSDFLSGRSPLTLALRVGDHMMFVQLQL---------AAQ 203

  Fly   205 VAPVAGGASGSSINAAASTTSTVPVMPAGTGCSGANSTSLSSSAVLAAAAAGVGGSTGTSGSGTS 269
            .||                                    |....|||||||              
Mouse   204 HAP------------------------------------LQHRHVLAAAAA-------------- 218

  Fly   270 SSSSSTSSSSSSSSSSSRTRSSGQRSSGRIGHGHVHSHQHPSLHAANWHGFSHGHGHGHSHGNGH 334
                                                                             
Mouse   219 ----------------------------------------------------------------- 218

  Fly   335 GHHHHHHHHHHHHHHHHNASAVAAGSGGGMSSLRKMYGDLPSSSGASGSAPATGTGQSQSSSTLN 399
                                  ||.:..|.||:                                
Mouse   219 ----------------------AAAAARGDSSV-------------------------------- 229

  Fly   400 GPDLTKLLIKGGIQNIVNSFALKDAGANARPVANGGSGSSPGKPVLEQSPIKSLSNLVSSPIKMT 464
                                        |.||      |||.:||...:.:..:|:..|||:.  
Mouse   230 ----------------------------ATPV------SSPCRPVSSAARVPPVSSSPSSPVS-- 258

  Fly   465 TIKNIPLPTTAATSSSSSCNCSSAAPSSSSSTSSGACATGGCQQDPIAAKLTSCLCTRLPTPSVA 529
                 |.|.||.:..|                                                 
Mouse   259 -----PSPVTAGSFRS------------------------------------------------- 269

  Fly   530 PPVATLVAPAPVARSGSTSSPSKCPES-SCSGANAGFAARSTLAGTRVTFSGNSMLHKTGNNRIT 593
                         .:.||:    |||. .||                                  
Mouse   270 -------------HAASTT----CPEQMDCS---------------------------------- 283

  Fly   594 RTKHRHYHGQGHGHGHGNGHSSSSSSSSSSSSSHFFNHACAGNQPSVNAAAFATSSSSSSSSPSS 658
                                                                ..:||||:|:|.|
Mouse   284 ----------------------------------------------------PPASSSSTSTPGS 296

  Fly   659 SSSSPSKRRKLEQGMGAGAVGATAATATAAATVALPASTSATTAEPDDSLLGVSDTRTLAEASRN 723
            |.:                                                              
Mouse   297 SPT-------------------------------------------------------------- 299

  Fly   724 LTQTLRKLSKEVFTNKIDLSGAGVVSSGRSSSSGATSSGAASGEEAPRKSGSGAVIESMKNHGKG 788
                                                          ||....||||||..||..|
Mouse   300 ----------------------------------------------PRSRKPGAVIESFVNHAPG 318

  Fly   789 IYSGTFSGTLNPALQDRFGRPKRDISTVIHILNDLLSATPQYGRGARISFEAPTTGSVSGSGSGS 853
            ::||||||||:|..||..|||:|||.|::.|||||||||..|                       
Mouse   319 VFSGTFSGTLHPNCQDSSGRPRRDIGTILQILNDLLSATRHY----------------------- 360

  Fly   854 GSSGSSSTTSSGSGLHHGSRSKMYSSKHHNCAKCNSRAQQQQQQSATLASGSGGSCSFRDCPSYH 918
                            .|....:...:.|  |:|                               
Mouse   361 ----------------QGMPPSLTQLRCH--AQC------------------------------- 376

  Fly   919 SSSAATKASTSSKSSSHSCCQTAEAPSSMTSQSNGCTCRYRRDDGQGEREREHTCQKCTVELANM 983
             |.|:.....:.|::|   |:...|.||.:........|..:..|...|:.|           |.
Mouse   377 -SPASPAPDLTPKTTS---CEKLAATSSTSLLQGQSQIRMCKPPGDRLRQTE-----------NR 426

  Fly   984 KTRSKMDQLRLVMQQHKQKREARKLKSGPYATAASASAADSLSSIAAGG 1032
            .||.|:::|:|::||.:.:|:||:...|||....|..|..|.||.:.||
Mouse   427 ATRCKVERLQLLLQQKRLRRKARRDARGPYHWTPSRKAGRSDSSSSGGG 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stxNP_001259426.1 UBQ 66..145 CDD:320785 33/78 (42%)
MidnNP_067540.1 Ubl_midnolin 32..101 CDD:340502 28/70 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838381
Domainoid 1 1.000 139 1.000 Domainoid score I4805
eggNOG 1 0.900 - - E1_28KXC
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 192 1.000 Inparanoid score I3844
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0009367
OrthoInspector 1 1.000 - - oto92650
orthoMCL 1 0.900 - - OOG6_110744
Panther 1 1.100 - - LDO PTHR23010
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5240
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.870

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