DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rph and RPH3AL

DIOPT Version :10

Sequence 1:NP_572651.1 Gene:Rph / 32002 FlyBaseID:FBgn0030230 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_008918.1 Gene:RPH3AL / 9501 HGNCID:10296 Length:315 Species:Homo sapiens


Alignment Length:239 Identity:97/239 - (40%)
Similarity:136/239 - (56%) Gaps:41/239 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 NKFVCPSDRQLALRAKLKAGWS-------SSKTSEPLRPEEQEAIISVIRRNEEIEVAERQRVGR 68
            :::|||:||||||||||:.|||       ..:..:.|.|.|.|||:.||:|.|.::|.|:||:||
Human    11 DQWVCPNDRQLALRAKLQTGWSVHTYQTEKQRRKQHLSPAEVEAILQVIQRAERLDVLEQQRIGR 75

  Fly    69 LVERVEKIKQHAVERGPNCCRLCGDTFGILRPQRILCEDCRQSVCTKCSVDINIRYHTSERSREI 133
            ||||:|.::::.:..|.:.|.|||:..|.|....:.|:|||:.|||||.::.     :..:.|.:
Human    76 LVERLETMRRNVMGNGLSQCLLCGEVLGFLGSSSVFCKDCRKKVCTKCGIEA-----SPGQKRPL 135

  Fly   134 WLCRICSETREMWKKSGAWFFKGLPKYDMPRSASATPIPNPGPGSMAGDTRAVQSCHATPTRPAR 198
            |||:||||.||:||:|||||:||||||.:       |:..||   .|.|..    ....||.||.
Human   136 WLCKICSEQREVWKRSGAWFYKGLPKYIL-------PLKTPG---RADDPH----FRPLPTEPAE 186

  Fly   199 VK---KLTIRV----------NDSSSSSS-GHSEPEDEV-DTGV 227
            .:   ..|.|:          :||.|.|. ..|..||.: .|||
Human   187 REPRSSETSRIYTWARGRVVSSDSDSDSDLSSSSLEDRLPSTGV 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RphNP_572651.1 FYVE_like_SF 84..172 CDD:333710 40/87 (46%)
C2A_Rabphilin_Doc2 354..477 CDD:176000
C2B_Rabphilin_Doc2 499..631 CDD:176030
RPH3ALNP_008918.1 FYVE_2 47..159 CDD:426716 55/116 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 170..315 19/68 (28%)
Blue background indicates that the domain is not in the aligned region.

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