DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rph and SYTL5

DIOPT Version :10

Sequence 1:NP_572651.1 Gene:Rph / 32002 FlyBaseID:FBgn0030230 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_001156806.1 Gene:SYTL5 / 94122 HGNCID:15589 Length:752 Species:Homo sapiens


Alignment Length:747 Identity:167/747 - (22%)
Similarity:278/747 - (37%) Gaps:188/747 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 SKTSE-----PLRPEEQEAIISVIRRNEEIEVAERQRVGRLVERVEKIKQHA---VERGPNCCRL 90
            ||.||     .|...|:|.|:.|::|:|.::..|.:|:.:|...:.:.|:.:   .:.....|..
Human     2 SKNSEFINLSFLLDHEKEMILGVLKRDEYLKKVEDKRIRKLKNELLEAKRRSGKTQQEASRVCVH 66

  Fly    91 CGDTFGILRPQRILCEDCRQSVCTKCSVDINIRYHTSERSREIWLCRICSETREMWKKSGAWFFK 155
            |....|::..:...|:.|...||.:|.|         ......|.|.:|.:..::...:|.|||:
Human    67 CHRNLGLIFDRGDPCQACSLRVCRECRV---------AGPNGSWKCTVCDKIAQLRIITGEWFFE 122

  Fly   156 GLPKYDMPRSASATPI-------PNPGPGSMAGDTRAVQSCHATPTRPARVKK------------ 201
            ...|.....:...|.:       .:||...:....:..|....:.|.|...||            
Human   123 EKAKRFKQVNVLGTDVVRQSILRRSPGAEEVQSQEQTRQDAEKSDTSPVAGKKASHDGPKRKGFL 187

  Fly   202 ------------LTIRVN---------------------DSSSSSSGHSEPEDEVDTG-----VG 228
                        :|.:.:                     .|...|:|.|:..|: :.|     ..
Human   188 LSKFRSATRGEIITPKTDTGRSYSLDLDGQHFRSLKSPPGSDRGSTGSSDLNDQ-EPGPRTPKSS 251

  Fly   229 IGVGVVGGGMAKGIASTRLQREDSFRLRAYGSIRSF----IDGGERKLSNSFFFNRQQSQRPSEC 289
            ...||..|..:....|||  ...|...|.||...|.    |:|..::|:.|  ..|..|..||..
Human   252 RSNGVTPGTQSSPAPSTR--TVTSVISREYGFENSMDLAAIEGTSQELTKS--HRRNTSGTPSIA 312

  Fly   290 PEYDSVSMSKLRRE----SSF---------LRRGS--------------------VSSSWS---- 317
            ....|:|..:.|.|    .||         :|..|                    |||..|    
Human   313 VSGTSLSSDQSRSELDLSESFTEDSEDTVSIRSKSVPGALDKDSLEETEESIDALVSSQLSTNTH 377

  Fly   318 -----ISDSSGSGSNN--------SGNSQTQS--QYQQHQQQLQQHCRDPLLGWLEIAISYREAF 367
                 :|.||.:||:.        ..:|.|.|  .......:...:....:.|.:.:.|||....
Human   378 RLASGLSTSSQAGSDRKWTYLNVPDADSDTTSLNSMMSVYSETGDYGNVKVSGEILLHISYCYKT 442

  Fly   368 HSLDCTMVRARDLPAMD-AAGLADPYCKLNIITPEAHTKYTRWQRTKTVHKT-RNPEFNETLQFV 430
            ..|...:...|:|...| .....|.|.| :.:.|:.    :|..:.||..:| .||||||||::.
Human   443 GGLYIFVKNCRNLAIGDEKKQRTDAYVK-SYLLPDK----SRNNKRKTKIRTGTNPEFNETLKYT 502

  Fly   431 GVEPEELGNSLIYVALFDDDKYG-HDFLGAAKVCLST---VHSTSQYRISVP-------LGVEDQ 484
             :...:|....:.::::..|::| :.|||..::...:   .:.|.::.:..|       :|:  |
Human   503 -ISHTQLETRTLQLSVWHYDRFGRNSFLGEVEIPFDSWNFENPTDEWFVLQPKVEFAPDIGL--Q 564

  Fly   485 YSNAAEMAQNW--PNGKMLL---------SLCYNTKRRALVVN-------VKQCINLMAMDNNGS 531
            |.....:...:  |...::|         :.....|:.:.|::       :|:..||.|:.:.|:
Human   565 YKGELTVVLRYIPPEENLMLPPEQLQGNKTFKKGKKKESPVISGGILEVFIKEAKNLTAVKSGGT 629

  Fly   532 SDPFVKIQLKPDAHKNKKHKTSVKWRTLNPIYNEEFYFEA-SPHDLNKEMLILTVWDKDLGKSND 595
            ||.|||..|.||..|..||||.|..:::||.:|..|.|.. .|.|:....|.||:|||:...||.
Human   630 SDSFVKGYLLPDDSKATKHKTLVIKKSVNPQWNHTFMFSGIHPQDIKNVCLELTIWDKEAFSSNI 694

  Fly   596 FLGSLQLGA-------------QSKGERLQQW 614
            |||.::|.:             .|:||..:.|
Human   695 FLGGVRLNSGSGVSHGKNVDWMDSQGEEQRLW 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RphNP_572651.1 FYVE_like_SF 84..172 CDD:333710 18/94 (19%)
C2A_Rabphilin_Doc2 354..477 CDD:176000 31/128 (24%)
C2B_Rabphilin_Doc2 499..631 CDD:176030 45/146 (31%)
SYTL5NP_001156806.1 PHD_SF 11..123 CDD:473978 27/120 (23%)
FYVE_Slp5 62..108 CDD:277305 12/54 (22%)
AF-4 <218..>376 CDD:461550 37/162 (23%)
C2A_SLP-4_5 429..552 CDD:175995 31/128 (24%)
C2B_SLP_1-2-3-4 566..744 CDD:175987 46/161 (29%)

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