DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rph and SYTL4

DIOPT Version :10

Sequence 1:NP_572651.1 Gene:Rph / 32002 FlyBaseID:FBgn0030230 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_001357091.1 Gene:SYTL4 / 94121 HGNCID:15588 Length:676 Species:Homo sapiens


Alignment Length:665 Identity:157/665 - (23%)
Similarity:264/665 - (39%) Gaps:156/665 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LRPEEQEAIISVIRRNEEIEVAERQRVGRLVERVEKIKQHAVERG-----PNCCRLCGDTFGILR 99
            |..||::.|:||::|:||:..|:.:|:.||...:.:||:...:||     ...|..|.::.|.|.
Human    10 LSEEEKDLILSVLQRDEEVRKADEKRIRRLKNELLEIKRKGAKRGSQHYSDRTCARCQESLGRLS 74

  Fly   100 PQRILCEDCRQSVCTKCSVDINIRYHTSERSREIWLCRICSETREMWKKSGAWFF---------- 154
            |:...|..|...||..|.:         :.|...|.|::|::..|:.|.:|.||:          
Human    75 PKTNTCRGCNHLVCRDCRI---------QESNGTWRCKVCAKEIELKKATGDWFYDQKVNRFAYR 130

  Fly   155 ----------KGLPKYDMPRSASATPIPNPGPGSMAGDTRAVQSCHATPTRPARVKKLTIRVN-- 207
                      :..|......:...:.:.....|.:....:.:|.....|:....|.||....:  
Human   131 TGSEIIRMSLRHKPAVSKRETVGQSLLHQTQMGDIWPGRKIIQERQKEPSVLFEVPKLKSGKSAL 195

  Fly   208 -------DSSSSSSGHSEPEDEVDTGVGIGVGVVGGGMAKGIASTRLQREDSFRLRAYGSIRSFI 265
                   ||.::.|..:...|.:|..     |:...........:::::|    .:..|....|:
Human   196 EAESESLDSFTADSDSTSRRDSLDKS-----GLFPEWKKMSAPKSQVEKE----TQPGGQNVVFV 251

  Fly   266 DGGERKLSNSFFFNRQQSQRPSEC--------PE---YDSVSMS--------------------- 298
            |.||.    .|..|.::..||||.        ||   ::|.|:.                     
Human   252 DEGEM----IFKKNTRKILRPSEYTKSVIDLRPEDVVHESGSLGDRSKSVPGLNVDMEEEEEEED 312

  Fly   299 -----KLRRES---SFLRRGS----VSSSWSISDSSGSGSN--NSGNSQTQSQYQQHQQQLQQHC 349
                 ||.|:.   |.::.||    :.|..||...:|...|  .:|......:|:|..|.|..|.
Human   313 IDHLVKLHRQKLARSSMQSGSSMSTIGSMMSIYSEAGDFGNIFVTGRIAFSLKYEQQTQSLVVHV 377

  Fly   350 RDPLLGWLEIAISYREAFHSLDCTMVRARDLPAMDAAGLADPYCKLNIITPEAHTKYTRWQRTKT 414
            :                    :|..:...|    :|...::||.|..:: |:...:..|  :|..
Human   378 K--------------------ECHQLAYAD----EAKKRSNPYVKTYLL-PDKSRQGKR--KTSI 415

  Fly   415 VHKTRNPEFNETLQFVGVEPEE-LGNSLIYVALFDDDKYGHD-FLGAAKVCLSTVHSTSQYRISV 477
            ...|.||.::|||::  ..||. |....:..:::...::|.: |||.|::.:.:.....:....:
Human   416 KRDTINPLYDETLRY--EIPESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCL 478

  Fly   478 PLGVEDQYSNAAEMAQNWPN--GKMLLSLCY---------NTKRRA-------LVVNVKQCINLM 524
            ||    ....:||.....|:  |::::||.|         ..::::       |.|.:|:..||.
Human   479 PL----HGKISAESPTGLPSHKGELVVSLKYIPASKTPVGGDRKKSKGGEGGELQVWIKEAKNLT 539

  Fly   525 AMDNNGSSDPFVKIQLKPDAHKNKKHKTSVKWRTLNPIYNEEF-YFEASPHDLNKEMLILTVWDK 588
            |....|:||.|||..|.|..:|..|.||.|..:||||.||..| |......||....|.|||||:
Human   540 AAKAGGTSDSFVKGYLLPMRNKASKRKTPVMKKTLNPHYNHTFVYNGVRLEDLQHMCLELTVWDR 604

  Fly   589 DLGKSNDFLGSLQLG 603
            :...||||||.::||
Human   605 EPLASNDFLGGVRLG 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RphNP_572651.1 FYVE_like_SF 84..172 CDD:333710 21/112 (19%)
C2A_Rabphilin_Doc2 354..477 CDD:176000 23/124 (19%)
C2B_Rabphilin_Doc2 499..631 CDD:176030 46/122 (38%)
SYTL4NP_001357091.1 PHD_SF 8..121 CDD:473978 36/119 (30%)
FYVE_Slp4 58..107 CDD:277303 14/57 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 199..243 7/52 (13%)
C2A_SLP-4_5 357..481 CDD:175995 31/156 (20%)
C2B_SLP_1-2-3-4 496..>622 CDD:175987 47/124 (38%)

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