DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rph and TCB2

DIOPT Version :10

Sequence 1:NP_572651.1 Gene:Rph / 32002 FlyBaseID:FBgn0030230 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_014312.1 Gene:TCB2 / 855637 SGDID:S000005031 Length:1178 Species:Saccharomyces cerevisiae


Alignment Length:463 Identity:94/463 - (20%)
Similarity:162/463 - (34%) Gaps:168/463 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   259 GSIRSFIDGGERKLSNSFFFNRQQSQRPSECPEYDSVSMSKLRRESSFLRRGSVSSSWSIS---- 319
            |.:|.||:..|         |.:......:...|..||::.:.|..:..|..:::..|:.|    
Yeast   650 GMLRVFINKAE---------NLRNPDSLGKISPYAKVSVNGVARGRTNERIETLNPIWNQSIYVS 705

  Fly   320 ---------------DSSGSGSN-NSGNSQTQSQYQQHQQQLQQHCRD--PLLGWL------EIA 360
                           |::|...| .|.|.|||:.|.:..........|  |..|.|      :..
Yeast   706 VTSPLQKVSIDCFGIDTNGDDHNLGSLNIQTQNIYHKDNDDKYTIFIDNAPRTGNLIGKKGVKGT 770

  Fly   361 ISYREAFHSLDCTMVRARDLP--AMDAAGLADPYCKLNIITPEAHTKYTRWQRTKTV-------- 415
            ::|..:|:.:         :|  :::.|...|          |.:.|..:.::.|:.        
Yeast   771 VTYYLSFYPV---------VPVLSLEEAKEVD----------EINEKKDKLEKQKSTLDDKNISK 816

  Fly   416 ---HKTRNPEF-----------------NETLQF------VGVEPEELGNSLIYVALFDDDKYGH 454
               .:.:..||                 :|.||:      |.|...||....:||..| .|..|:
Yeast   817 EEKERIKKEEFRLTEKYDMYSYKMKLDLDELLQYNAGVLGVTVLGGELPQPGLYVQTF-FDSCGY 880

  Fly   455 DFLGAAKVCLSTVH--------------STSQYRISVPLGVEDQYSNAAE---MAQNWPNGKMLL 502
            ..:.:||..:.|:.              |.:.:|::     :.:.:|.||   ...|.|..:::.
Yeast   881 AAITSAKNAIRTIKTGWSGDFMIKELEWSVTTFRVT-----KTKDANKAENFICEVNIPTIELVR 940

  Fly   503 SLCY---------NTKRRALVVNV--------------------------KQCINLMAMDNNGSS 532
            : ||         ..|...|:|.|                          |...||:.::.||.|
Yeast   941 N-CYYKPSVLNLIGKKSAKLLVQVSWFPVTATELPQSDLITNSGDLKITAKSAENLIGVNKNGYS 1004

  Fly   533 DPFVKIQLKPDAHKNKK-----HKTSVKWRTLNPIYNEEFYFEASPHDLNK--EMLILTVWDKDL 590
            ||:|:..|      |:|     .||:|:.:||||.:||....|.|    |:  :.|.:.|.|.:.
Yeast  1005 DPYVEFFL------NEKSTSPFFKTAVQKKTLNPTWNESKTIEVS----NRVNDYLTINVKDYES 1059

  Fly   591 GKSNDFLG 598
            ..||..:|
Yeast  1060 TNSNRSIG 1067

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RphNP_572651.1 FYVE_like_SF 84..172 CDD:333710
C2A_Rabphilin_Doc2 354..477 CDD:176000 29/178 (16%)
C2B_Rabphilin_Doc2 499..631 CDD:176030 36/142 (25%)
TCB2NP_014312.1 COG5038 4..1178 CDD:227371 94/463 (20%)
Blue background indicates that the domain is not in the aligned region.

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