DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rph and AT1G73580

DIOPT Version :10

Sequence 1:NP_572651.1 Gene:Rph / 32002 FlyBaseID:FBgn0030230 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_177499.1 Gene:AT1G73580 / 843692 AraportID:AT1G73580 Length:168 Species:Arabidopsis thaliana


Alignment Length:134 Identity:36/134 - (26%)
Similarity:64/134 - (47%) Gaps:27/134 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   513 LVVNVKQCINLMAMDNNGSSDPFVKIQLKPDAHKNKKHKTSVKWRTLNPIYNEEFYFEASPHDLN 577
            |.|.|::.:||...|.: ||||:|.::|     ..:|.||.|..:.:||.:.|:..|..:..:| 
plant    11 LRVRVQRGVNLAVRDVS-SSDPYVVLKL-----GRQKLKTKVVKQNVNPQWQEDLSFTVTDPNL- 68

  Fly   578 KEMLILTVWDKDLGKSNDFLGSLQLGAQSKGERLQQWLDCIR-----LPDHF------HEKWHCL 631
              .|.|.|:|.|....:|.:|..::.       |:.:::.:|     |||..      ..:.:||
plant    69 --PLTLIVYDHDFFSKDDKMGDAEID-------LKPYIEALRMELSGLPDGTIISTIGPSRGNCL 124

  Fly   632 APDN 635
            |.::
plant   125 AEES 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RphNP_572651.1 FYVE_like_SF 84..172 CDD:333710
C2A_Rabphilin_Doc2 354..477 CDD:176000
C2B_Rabphilin_Doc2 499..631 CDD:176030 33/128 (26%)
AT1G73580NP_177499.1 C2_ArfGAP 8..151 CDD:176003 36/134 (27%)
Blue background indicates that the domain is not in the aligned region.

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