DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rph and AT1G70810

DIOPT Version :10

Sequence 1:NP_572651.1 Gene:Rph / 32002 FlyBaseID:FBgn0030230 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_565002.1 Gene:AT1G70810 / 843418 AraportID:AT1G70810 Length:165 Species:Arabidopsis thaliana


Alignment Length:124 Identity:40/124 - (32%)
Similarity:57/124 - (45%) Gaps:13/124 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   513 LVVNVKQCINLMAMDNNGSSDPFVKIQLKPDAHKNKKHKTSVKWRTLNPIYNEEFYFEASPHDLN 577
            |.:.||:.|||...|.. ||||||.|.:     .::|.||.|.....||.:|||........|  
plant     8 LRIRVKRGINLAQRDTL-SSDPFVVITM-----GSQKLKTRVVENNCNPEWNEELTLALRHPD-- 64

  Fly   578 KEMLILTVWDKDLGKSNDFLGSLQLGAQSKGE----RLQQWLDCIRLPDHFHEKWHCLA 632
             |.:.|.|:|||...|:|.:|..::..:...|    .||:..|...:......:.:|||
plant    65 -EPVNLIVYDKDTFTSHDKMGDAKIDIKPFLEVHKMGLQELPDGTEIKRVVPNRENCLA 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RphNP_572651.1 FYVE_like_SF 84..172 CDD:333710
C2A_Rabphilin_Doc2 354..477 CDD:176000
C2B_Rabphilin_Doc2 499..631 CDD:176030 37/121 (31%)
AT1G70810NP_565002.1 C2_ArfGAP 5..148 CDD:176003 40/124 (32%)
Blue background indicates that the domain is not in the aligned region.

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