DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rph and SYT3

DIOPT Version :10

Sequence 1:NP_572651.1 Gene:Rph / 32002 FlyBaseID:FBgn0030230 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_115674.1 Gene:SYT3 / 84258 HGNCID:11511 Length:590 Species:Homo sapiens


Alignment Length:488 Identity:126/488 - (25%)
Similarity:198/488 - (40%) Gaps:81/488 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 PRSASATPIPNPGPGSMAGDTRAVQSCHATPTRPARVKKLTIRVNDSSSSSSGHSEPEDEVDTGV 227
            |.|...:..|.|....|.....|..:..|...:|::                  :.||...:.|.
Human   148 PGSLGGSDTPEPSYLDMDSYPEAAAAAVAAGVKPSQ------------------TSPELPSEGGA 194

  Fly   228 GIGVGVV---GGGMAKGIASTRLQREDSFRLRAYGSIRSFIDGGERKLSNSFFFNR---QQSQRP 286
            |.|:.::   |||:..  |.:..|.........|.::       .|.|:.....::   ...:||
Human   195 GSGLLLLPPSGGGLPS--AQSHQQVTSLAPTTRYPAL-------PRPLTQQTLTSQPDPSSEERP 250

  Fly   287 SECP------EYDSVSMSKLRRESSFLRRGSVSSSWSISDSSGSGSNNSGNSQTQSQYQQHQQQL 345
            ...|      |..:..:.:::.|   |.:|:...........|||...:|               
Human   251 PALPLPLPGGEEKAKLIGQIKPE---LYQGTGPGGRRSGGGPGSGEAGTG--------------- 297

  Fly   346 QQHCRDPLLGWLEIAISYREAFHSLDCTMVRARDLPAMDAAGLADPYCKLNIITPEAHTKYTRWQ 410
             ..|     |.:..|:.|......|...:::|.||||.|:.|.:|||.|:.:: |:...|:    
Human   298 -APC-----GRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLL-PDRKKKF---- 351

  Fly   411 RTKTVHKTRNPEFNETLQFVGVEPEELGNSLIYVALFDDDKYG-HDFLGAAKVCLSTVHSTSQYR 474
            :||...||.||.||||.|| .|...||....::.:::|.|::. ||.:|  :|.|..:...::..
Human   352 QTKVHRKTLNPVFNETFQF-SVPLAELAQRKLHFSVYDFDRFSRHDLIG--QVVLDNLLELAEQP 413

  Fly   475 ISVPLGVEDQYSNAAEMAQNWPNGKMLLSLCYNTKRRALVVNVKQCINLMAMDNNGSSDPFVKIQ 539
            ...||. .|.....:|.|.   .|::..||||......|.|.:.:..||.|||..|.|||:||..
Human   414 PDRPLW-RDIVEGGSEKAD---LGELNFSLCYLPTAGRLTVTIIKASNLKAMDLTGFSDPYVKAS 474

  Fly   540 LKPDAHKNKKHKTSVKWRTLNPIYNEEFYFEASPHDLNKEMLILTVWDKDLGKSNDFLGSLQLG- 603
            |..:..:.||.|||:|..||||.|||...|:.:|..:....|.:.|.|.|....|:.:|..::| 
Human   475 LISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGP 539

  Fly   604 --AQSKGERLQQWLDCIRLPDHFHEKWHCLAPD 634
              |...|.  :.|.:.:..|....|.||.|..:
Human   540 DAADPHGR--EHWAEMLANPRKPVEHWHQLVEE 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RphNP_572651.1 FYVE_like_SF 84..172 CDD:333710 2/8 (25%)
C2A_Rabphilin_Doc2 354..477 CDD:176000 39/123 (32%)
C2B_Rabphilin_Doc2 499..631 CDD:176030 47/134 (35%)
SYT3NP_115674.1 Cysteine motif. /evidence=ECO:0000250|UniProtKB:O35681 10..34
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 143..220 18/91 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 234..260 3/25 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 273..295 6/24 (25%)
C2A_Synaptotagmin-1-5-6-9-10 299..424 CDD:176031 43/138 (31%)
C2B_Synaptotagmin-3-5-6-9-10 433..567 CDD:176048 48/135 (36%)
Blue background indicates that the domain is not in the aligned region.

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