Protein Alignment Rph and SYTD

DIOPT Version :9

• Sequence 1: NP_572651.1
• Gene: Rph / 32002
• FlyBaseID: FBgn0030230
• Length: 638
• Species: Drosophila melanogaster
• Sequence 2: NP_196671.2
• Gene: SYTD / 830978
• AraportID: AT5G11100
• Length: 569
• Species: Arabidopsis thaliana
• Alignment Length: 327
• Identity: 89/327 - (27%)
• Similarity: 135/327 - (41%)
• Gaps: 101/327 - (30%)

  Fly   370 LDCTMVRARDLPAMDAAGLADPYCKLNIITPEAHTKYTRWQRTKTVHKTRNPEFNETLQFVGVEP 434
            ||..:|:|:||...|..|.:|||..:.|......||     :|||:..:.||.:||..:|:   .
plant   266 LDVKVVQAKDLANKDMIGKSDPYAIVFIRPLPDRTK-----KTKTISNSLNPIWNEHFEFI---V 322

  Fly   435 EELGNSLIYVALFDDDKYG-HDFLGAAKVCLSTVHSTSQYRISVPLGVEDQYSNAA---EMAQNW 495
            |::....:.|.:|||:..| ...:|||:|.|:.:         ||..|:|.:....   |:.::.
plant   323 EDVSTQHLTVRVFDDEGVGSSQLIGAAQVPLNEL---------VPGKVKDIWLKLVKDLEIQRDT 378

  Fly   496 PN-GKMLLSLCY----------------------------------NTKRRALVVNVKQCI---- 521
            .| |::.|.|.|                                  .|..:.||.:.|:.:
plant   379 KNRGQVQLELLYCPLGKEGGLKNPFNPDYSLTILEKVLKPESEDSDATDMKKLVTSKKKDVIVRG 443

  Fly   522 ----------NLMAMDNNGSSDPFVKIQLKPDAHKNKKHKTSVKWRTLNPIYNEEFYF--EASPH 574
                      :|.|:|..|.:|.||.|.||   ....|.||.|...:|||::|:.|.|  |.:.|
plant   444 VLSVTVVAAEDLPAVDFMGKADAFVVITLK---KSETKSKTRVVPDSLNPVWNQTFDFVVEDALH 505

  Fly   575 DLNKEMLILTVWDKD-LGKSNDFLGSLQL---GAQSKGERLQQWLD---------CIRLPDHFHE 626
            ||    |.|.|||.| .||  |.:|.:.:   ....:|| .|:|.:         |:      |.
plant   506 DL----LTLEVWDHDKFGK--DKIGRVIMTLTRVMLEGE-FQEWFELDGAKSGKLCV------HL 557

  Fly   627 KW 628
            ||
plant   558 KW 559

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rph	NP_572651.1	PHD_SF	84..172	CDD:304600
		C2A_Rabphilin_Doc2	354..477	CDD:176000	33/107 (31%)
		C2B_Rabphilin_Doc2	499..631	CDD:176030	49/193 (25%)
SYTD	NP_196671.2	SMP_LBD	69..251	CDD:293652
		C2	264..368	CDD:278593	37/118 (31%)
		C2	443..545	CDD:278593	38/111 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910