DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rph and ZAC

DIOPT Version :10

Sequence 1:NP_572651.1 Gene:Rph / 32002 FlyBaseID:FBgn0030230 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_567620.1 Gene:ZAC / 827864 AraportID:AT4G21160 Length:337 Species:Arabidopsis thaliana


Alignment Length:322 Identity:72/322 - (22%)
Similarity:110/322 - (34%) Gaps:99/322 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   322 SGSGSNNSGNSQTQSQYQQHQQQLQQHCRDPLLGWLEIAISYREAFHSLDCTMVRARDLPA---- 382
            :|.|...||..:.:....|...::...|..|...|....|.   .|..|.|..|. |.|.:    
plant     6 AGLGKPGSGKRRIRDLLTQSDNRVCADCGAPDPKWASANIG---VFICLKCCGVH-RSLGSHISK 66

  Fly   383 -----------------MDAAGLADPYCKLNIITPE---------AHTKYTRWQRTKTVHKTRNP 421
                             ::..|.|..........||         :|.:..|:.|:|..|:    
plant    67 VLSVTLDEWSDEEVDSMIEIGGNASANSIYEAFIPEGSSKPGPDASHDQRMRFIRSKYEHQ---- 127

  Fly   422 EF-NETLQFVGVE------PEELGNSLIYVALFDDDKYGHDFLGAAKVCLS-TVHSTSQYRISVP 478
            || ..:|:...|.      |..|.:||                 :.|:..| ..:|:||      
plant   128 EFLKPSLRITSVRGSSTKTPAFLSSSL-----------------SKKIVDSFRTNSSSQ------ 169

  Fly   479 LGVEDQYSNAAEMAQNWPNGKMLLSLCYNTKRRALVVNVKQCINLMAMDNNGSSDPFVKIQLKPD 543
               :.|.....|          .:.|        |.|.:|:..| ||:.:..||||:|.:.|   
plant   170 ---QPQLEGMVE----------FIGL--------LKVTIKKGTN-MAIRDMMSSDPYVVLTL--- 209

  Fly   544 AHKNKKHKTSVKWRTLNPIYNEEFYFEASPHDLNKEMLILTVWDKDLGKSNDFLGSLQLGAQ 605
             .:.|...|.|| ..|||::|||..... ||  |...:.|.|:|.|...::|.:|..::..|
plant   210 -GQQKAQSTVVK-SNLNPVWNEELMLSV-PH--NYGSVKLQVFDYDTFSADDIMGEAEIDIQ 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RphNP_572651.1 FYVE_like_SF 84..172 CDD:333710
C2A_Rabphilin_Doc2 354..477 CDD:176000 30/160 (19%)
C2B_Rabphilin_Doc2 499..631 CDD:176030 33/107 (31%)
ZACNP_567620.1 ArfGap 18..124 CDD:350058 18/109 (17%)
C2_ArfGAP 180..324 CDD:176003 33/104 (32%)
Blue background indicates that the domain is not in the aligned region.

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