DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rph and AT2G21010

DIOPT Version :10

Sequence 1:NP_572651.1 Gene:Rph / 32002 FlyBaseID:FBgn0030230 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_179697.2 Gene:AT2G21010 / 816635 AraportID:AT2G21010 Length:256 Species:Arabidopsis thaliana


Alignment Length:210 Identity:50/210 - (23%)
Similarity:83/210 - (39%) Gaps:53/210 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   387 GLADPYCKLNIITPEAHTKYTRWQRTKTVHKTRNPEFNETLQFVGVEPEELGNSLIYVALFDDDK 451
            |:.:||.::.:...:..:|     :|...||..|||:||..:|...:|:   ..::...::..:|
plant     2 GMINPYVQIELSEDKISSK-----KTTVKHKNLNPEWNEEFKFSVRDPK---TQVLEFNVYGWEK 58

  Fly   452 YG-HDFLGAAKVCLSTVHS------TSQYRISVPLGVEDQYSNAAEMAQNWPNGKMLLSLCYN-- 507
            .| ||.:|...:.|..:..      |.:.|.::..|.|.|....        .||:.:.|.|.  
plant    59 IGKHDKMGMNVLALKELAPDERKAFTLEL
RKTLDGGEEGQPGKY--------RGKLEVELLYKPF 115

  Fly   508 TKRR----------------ALVVNVKQCINLMAMDNNGS--SDPFVKIQLKPDAHKNKKHKTSV 554
            |:..                .|||.|..     |.|..|.  ::|:|.|..|.:..|.|..|   
plant   116 TEEEMQAVQKAPEGTPVAGGMLVVIVHS-----AEDVEGKHHTNPYVHIYFKGEERKTKNVK--- 172

  Fly   555 KWRTLNPIYNEEFYF 569
              :..:|.:||||.|
plant   173 --KNKDPKWNEEFSF 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RphNP_572651.1 FYVE_like_SF 84..172 CDD:333710
C2A_Rabphilin_Doc2 354..477 CDD:176000 22/96 (23%)
C2B_Rabphilin_Doc2 499..631 CDD:176030 24/91 (26%)
AT2G21010NP_179697.2 C2 1..87 CDD:425499 21/92 (23%)
C2 135..238 CDD:425499 20/61 (33%)
Blue background indicates that the domain is not in the aligned region.

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