DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rph and syt15

DIOPT Version :9

Sequence 1:NP_572651.1 Gene:Rph / 32002 FlyBaseID:FBgn0030230 Length:638 Species:Drosophila melanogaster
Sequence 2:XP_009305102.1 Gene:syt15 / 798021 ZFINID:ZDB-GENE-090527-2 Length:435 Species:Danio rerio


Alignment Length:530 Identity:108/530 - (20%)
Similarity:171/530 - (32%) Gaps:193/530 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 MWKKSGA-WFFKGL----PKYDMPRSASATPIPNPGPGSMAGDTRAVQSCHATPTRPARVKKLTI 204
            :|:|... .|::||    |  .:||  ..||:......|..|...:.......|.|..|..:|..
Zfish    46 LWRKRRTQTFYRGLIPATP--TIPR--CITPVLQTSQSSTYGSHGSGDVPFIVPPRFKRAPQLND 106

  Fly   205 RVNDSSSSSSGHSEPEDEVDTGVGIGVGVVGGGMAKGIASTRLQREDSFRLRAYGSIRSFIDGGE 269
            :..:|:|:......|:.....| .:.||                  ..|.|   ||||..:    
Zfish   107 KKEESNSAEQWDLNPDLHSQRG-SLTVG------------------SWFPL---GSIRPDL---- 145

  Fly   270 RKLSNSFFFNRQQSQRPSECPEYDSVSMSKLRRESSFLRRGSVSSSWSISDSSGSGSNNSGNSQT 334
                      .|..:.|||                           |::.|.|...         
Zfish   146 ----------YQLPEEPSE---------------------------WALPDGSAVR--------- 164

  Fly   335 QSQYQQHQQQLQQHCRDPLLGWLEIAISYREAFHSLDCTMVRARDLPAMDAAGLADPYCKLNI-- 397
                                  |..|:.|::....|..:::||.:||..         |:.||  
Zfish   165 ----------------------LWFALRYQQDKEQLVVSLLRAANLPTQ---------CQRNITL 198

  Fly   398 ----ITPEAHTKYTRWQRTKTVHKTRNPEFNETLQFVGVEPEELGNSLI-----YVALFD-DDKY 452
                :.|....::   ::.|...|..:|:||:|..|      ::.||.:     .::||. |.:.
Zfish   199 VKLQLLPSDDRRH---RQAKARRKGCHPQFNDTFVF------QVSNSCVDQCSLNMSLFTVDHQK 254

  Fly   453 GHDFLGAAKVCLSTVHSTSQYRISVPLGVEDQYSNAAEMAQNW------------PNGKMLLSLC 505
            .|..:|               :|.:|| :..:...||...| |            .||.:.:||.
Zfish   255 KHHLMG---------------QILIPL-ICSELKEAAGKVQ-WRDLDNESDQPLSKNGDIQVSLN 302

  Fly   506 YNTKRRALVVNV-----KQCINLMAMDNNGSSDPFVKIQLKPDAHKNKKHKTSV---KWRTL--- 559
            ||.....|.|.|     .||.:..|:        ..|:.||  .|      |.|   ||.|:   
Zfish   303 YNQSLHRLTVVVLRARGLQCCSEAAV--------CAKVCLK--IH------TQVVRNKWTTVAKG 351

  Fly   560 -NPIYNEEFYFEASPHDLNKEMLILTVWDKDLGKSNDFLGSLQLG--AQSKGERLQQWLDCIRLP 621
             :|.:||:..|...|..|:...|.|.:......|. ..|..:.:|  ..::|..|:.|.|.:..|
Zfish   352 NSPSFNEKLTFRLLPMQLDTACLSLQIQQPSTEKP-VLLAIVVIGPFMYARGRELEHWNDMVSKP 415

  Fly   622 DHFHEKWHCL 631
            .....:||.|
Zfish   416 QELVRQWHPL 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RphNP_572651.1 PHD_SF 84..172 CDD:304600 10/31 (32%)
C2A_Rabphilin_Doc2 354..477 CDD:176000 27/134 (20%)
C2B_Rabphilin_Doc2 499..631 CDD:176030 37/145 (26%)
syt15XP_009305102.1 C2A_Synaptotagmin-15-17 164..285 CDD:176036 33/186 (18%)
C2B_Synaptotagmin-15 294..426 CDD:176054 40/149 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.