DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rph and SYT4

DIOPT Version :10

Sequence 1:NP_572651.1 Gene:Rph / 32002 FlyBaseID:FBgn0030230 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_065834.1 Gene:SYT4 / 6860 HGNCID:11512 Length:425 Species:Homo sapiens


Alignment Length:327 Identity:92/327 - (28%)
Similarity:146/327 - (44%) Gaps:56/327 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   324 SGSNNSGNSQTQSQYQQHQQQLQQHCRDPLLGWLEIAISY---REAFHSLDCTMVRARDLPAMDA 385
            |.|..|..|.|....::.|::         ||.|..::.|   |:||   ...:..||.|||||.
Human   133 SVSPESLKSSTSLTSEEKQEK---------LGTLFFSLEYNFERKAF---VVNIKEARGLPAMDE 185

  Fly   386 AGL-ADPYCKLNIITPEAHTKYTRWQRTKTVHKTRNPEFNETLQFVGVEPEELGNSLIYVALFDD 449
            ..: :|||.|:.|:..:.|.     .:|:.:.||.:|.|:||..|.|:...::....::..:...
Human   186 QSMTSDPYIKMTILPEKKHK-----VKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSF 245

  Fly   450 DKYGH-DFLGAAKVCLSTVHSTSQYRISVPLGVEDQYSNAAEMAQNWP-----------NGKMLL 502
            |::.. |.:|...:.||              |:|   .:..:|..|..           .|::|:
Human   246 DRFSRDDIIGEVLIPLS--------------GIE---LSEGKMLMNREIIKRNVRKSSGRGELLI 293

  Fly   503 SLCYNTKRRALVVNVKQCINLMAMDNNGSSDPFVKIQLKPDAHKNKKHKTSVKWRTLNPIYNEEF 567
            ||||.:....|.|.|.:..:|...|.:|.|||:||:.|.....:..|.||.||..|.|.::||.|
Human   294 SLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELF 358

  Fly   568 YFE---ASPHDLNKEMLILTVWDKDLGKSNDFLGSLQLGAQSKGERLQQWLDCIRLPDHFHEKWH 629
            .|:   ....|::.|.|:|   |.:.|..|:.:|.|.|||.::|...:.|.:....|.....|||
Human   359 VFDIPCEGLEDISVEFLVL---DSERGSRNEVIGQLVLGAAAEGTGGEHWKEICDYPRRQIAKWH 420

  Fly   630 CL 631
            .|
Human   421 VL 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RphNP_572651.1 FYVE_like_SF 84..172 CDD:333710
C2A_Rabphilin_Doc2 354..477 CDD:176000 34/127 (27%)
C2B_Rabphilin_Doc2 499..631 CDD:176030 46/134 (34%)
SYT4NP_065834.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..93
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..147 5/13 (38%)
C2A_Synaptotagmin-4-11 153..279 CDD:176034 38/159 (24%)
C2B_Synaptotagmin-4 288..423 CDD:176049 48/138 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.