DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rph and SYT1

DIOPT Version :10

Sequence 1:NP_572651.1 Gene:Rph / 32002 FlyBaseID:FBgn0030230 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_005630.1 Gene:SYT1 / 6857 HGNCID:11509 Length:422 Species:Homo sapiens


Alignment Length:359 Identity:107/359 - (29%)
Similarity:169/359 - (47%) Gaps:40/359 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   278 FNRQQSQRPSECPEYDSVSMSKLRRESSFLRRGSVSSSWSISDSSGSGSNNSGNSQTQSQYQQHQ 342
            |.::..::..|....::::|..::      ..|......::.|.........|..:.:.:.::. 
Human    85 FKKKNKKKGKEKGGKNAINMKDVK------DLGKTMKDQALKDDDAETGLTDGEEKEEPKEEEK- 142

  Fly   343 QQLQQHCRDPLLGWLEIAISYREAFHSLDCTMVRARDLPAMDAAGLADPYCKLNIITPEAHTKYT 407
                       ||.|:.::.|....:.|...:::|.:|||:|..|.:|||.|: .:.|:...|: 
Human   143 -----------LGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKV-FLLPDKKKKF- 194

  Fly   408 RWQRTKTVHKTRNPEFNETLQFVGVEPEELGNSLIYVALFDDDKYG-HDFLGAAKVCLSTV---H 468
               .||...||.||.|||...| .|...|||...:.:|::|.|::. ||.:|..||.::||   |
Human   195 ---ETKVHRKTLNPVFNEQFTF-KVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGH 255

  Fly   469 STSQYRISVPLGVEDQYSNAAEMAQNWPNGKMLLSLCYNTKRRALVVNVKQCINLMAMDNNGSSD 533
            .|.::|        |..|  ||..:....|.:..||.|......|.|.:.:..||..||..|.||
Human   256 VTEEWR--------DLQS--AEKEEQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSD 310

  Fly   534 PFVKIQLKPDAHKNKKHKTSVKWRTLNPIYNEEFYFEASPHDLNKEMLILTVWDKD-LGKSNDFL 597
            |:|||.|..:..:.||.||::|..||||.|||.|.||.....:.|..:::||.|.| :|| ||.:
Human   311 PYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGK-NDAI 374

  Fly   598 GSLQLGAQSKGERLQQWLDCIRLPDHFHEKWHCL 631
            |.:.:|..|.|..|:.|.|.:..|.....:||.|
Human   375 GKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTL 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RphNP_572651.1 FYVE_like_SF 84..172 CDD:333710
C2A_Rabphilin_Doc2 354..477 CDD:176000 44/126 (35%)
C2B_Rabphilin_Doc2 499..631 CDD:176030 51/132 (39%)
SYT1NP_005630.1 Syt1_N 6..113 CDD:409248 4/33 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 113..142 2/28 (7%)
Phospholipid binding. /evidence=ECO:0000305 136..382 92/274 (34%)
C2A_Synaptotagmin-1-5-6-9-10 143..265 CDD:176031 45/135 (33%)
C2B_Synaptotagmin-1 274..409 CDD:176047 53/136 (39%)
Blue background indicates that the domain is not in the aligned region.

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