DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rph and Syt11

DIOPT Version :10

Sequence 1:NP_572651.1 Gene:Rph / 32002 FlyBaseID:FBgn0030230 Length:638 Species:Drosophila melanogaster
Sequence 2:XP_006232810.1 Gene:Syt11 / 60568 RGDID:62042 Length:430 Species:Rattus norvegicus


Alignment Length:411 Identity:100/411 - (24%)
Similarity:168/411 - (40%) Gaps:83/411 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   281 QQSQRPSECPEYDSVSM-----------------SKLRRESSFLRRGSVSSSWSISDSSGSGSNN 328
            ||:::..:.|.|..:.|                 .|:||:.....|.|...:..::..||..|::
  Rat    42 QQAEKKHKTPPYKFIHMLKGISIYPETLSNKKKIIKVRRDKDGSHRESGRGNLLVNAESGLLSHD 106

  Fly   329 ---------------------------------SGNSQTQSQYQQHQQQLQQHCRDPLLGWLEIA 360
                                             .|.|:..|.....:        |.:||.|..:
  Rat   107 RDPRGPSPASCIDQLPIKRDYGEELRSPMTSLTPGESKPTSPSSPEE--------DVMLGSLTFS 163

  Fly   361 ISYREAFHSLDCTMVRARDLPAMDAAGL-ADPYCKLNIITPEAHTKYTRWQRTKTVHKTRNPEFN 424
            :.|.....:|..|:..|..||.||.... :|||.|:.|:..:.|.     .:|:.:.||.:|.|:
  Rat   164 VDYNFPKKALVVTIQEAHGLPVMDGQTQGSDPYIKMTILPDKRHR-----VKTRVLRKTLDPVFD 223

  Fly   425 ETLQFVGVEPEELGNSLIYVALFDDDKYGH-DFLGAAKVCLSTVH-STSQYRIS---VPLGVEDQ 484
            ||..|.|:...:|.:.:::..:...|::.. |.:|...|.|:.|. ||.:.:::   :...::..
  Rat   224 ETFTFYGIPYSQLQDLVLHFLVLSFDRFSRDDVIGEVMVPLAGVDPSTGKVQLTRDIIKRNIQKC 288

  Fly   485 YSNAAEMAQNWPNGKMLLSLCYNTKRRALVVNVKQCINLMAMDNNG-SSDPFVKIQLKPDAHKNK 548
            .|          .|::.:||.|....:.:.|.|.:..:|..||..| |.:|:||:.:.....:..
  Rat   289 IS----------RGELQVSLSYQPVAQRMTVVVLKARHLPKMDITGLSGNPYVKVNVYYGRKRIA 343

  Fly   549 KHKTSVKWRTLNPIYNEEFYFEASPHDLNKEMLI-LTVWDKDLGKSNDFLGSLQLGAQS-KGERL 611
            |.||.||..|||||:||.|.::. |.||..::.| ..|.|.|....|:.:|.|.|||.| .....
  Rat   344 KKKTHVKKCTLNPIFNESFIYDI-PTDLLPDISIEFLVIDFDRTTKNEVVGRLILGAHSVTTSGA 407

  Fly   612 QQWLDCIRLPDHFHEKWHCLA 632
            :.|.:....|.....|||.|:
  Rat   408 EHWREVCESPRKPVAKWHSLS 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RphNP_572651.1 FYVE_like_SF 84..172 CDD:333710
C2A_Rabphilin_Doc2 354..477 CDD:176000 35/128 (27%)
C2B_Rabphilin_Doc2 499..631 CDD:176030 45/134 (34%)
Syt11XP_006232810.1 C2A_Synaptotagmin-4-11 157..282 CDD:176034 35/129 (27%)
C2B_Synaptotagmin-4 291..428 CDD:176049 46/137 (34%)
Blue background indicates that the domain is not in the aligned region.

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