DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rph and Syt9

DIOPT Version :10

Sequence 1:NP_572651.1 Gene:Rph / 32002 FlyBaseID:FBgn0030230 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_068689.2 Gene:Syt9 / 60510 MGIID:1926373 Length:491 Species:Mus musculus


Alignment Length:444 Identity:117/444 - (26%)
Similarity:184/444 - (41%) Gaps:103/444 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 SSSSSGHSEPEDEVDTGVGIGVGVVGGGMAKGIASTRLQRE-----DSFRLRAYGSIRSFIDGGE 269
            ||....|:.|:        |.:....||......:.|:||:     .|.|   :.|||.     :
Mouse   125 SSMKISHTSPD--------IPLSTQPGGQENCAHAVRVQRQVTEPTPSAR---HNSIRR-----Q 173

  Fly   270 RKLSNSFFFNRQQSQRPSECPEYDSVSMSKLRRESSFLRRGSVSSSWSISDSSGSGSNNSGNSQT 334
            ..|||. .||.||.||..:.     ..:.:::.|        :....|:.:..|..||:..    
Mouse   174 LNLSNP-DFNIQQLQRQEQL-----TGIGRIKPE--------LYKQRSLDNDDGRRSNSKA---- 220

  Fly   335 QSQYQQHQQQLQQHCRDPLLGWLEIAISYREAFHSLDCTMVRARDLPAMDAAGLADPYCKLNIIT 399
                          |     |.|...:.|......|...:.:|.:|||.|.:|.:|||.|:.:: 
Mouse   221 --------------C-----GKLNFILKYDCDLEQLIVKIHKAVNLPAKDFSGTSDPYVKIYLL- 265

  Fly   400 PEAHTKYTRWQRTKTVHKTRNPEFNETLQFVGVEPEELGNSLIYVALFDDDKYG-HDFLGAAKVC 463
            |:..||:    :||...||.||.|:|...| .|...:|....::.:::|.|::. ||.:|..   
Mouse   266 PDRKTKH----QTKVHRKTLNPVFDEVFLF-PVHYNDLEARKLHFSVYDFDRFSRHDLIGQV--- 322

  Fly   464 LSTVHSTSQYRISVPLGVEDQYSNAAEMAQN---WPN-----------GKMLLSLCYNTKRRALV 514
                             |.|.:.:.|:..:.   |.:           |:::.||||......|.
Mouse   323 -----------------VVDHFFDLADFPRECILWKDIEYVTNDNVDLGELMFSLCYLPTAGRLT 370

  Fly   515 VNVKQCINLMAMDNNGSSDPFVKIQLKPDAHKNKKHKTSVKWRTLNPIYNEEFYFEASPHDLNKE 579
            :.:.:..||.|||..|:|||:||:.|..|..:.||.|||.|..||||:|||...|:..|..:::.
Mouse   371 ITIIKARNLKAMDITGASDPYVKVSLMCDGRRLKKRKTSTKRNTLNPVYNEAIVFDVPPESIDQI 435

  Fly   580 MLILTVWDKDLGKSNDFLGSLQLGAQSKGERL--QQWLDCIRLPDHFHEKWHCL 631
            .|.:.|.|.|....|:.:|..|:|  ::.|||  ..|.:.:..|......||.|
Mouse   436 HLSIAVMDYDRVGHNEVIGVCQVG--NEAERLGRDHWSEMLSYPRKPIAHWHSL 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RphNP_572651.1 FYVE_like_SF 84..172 CDD:333710
C2A_Rabphilin_Doc2 354..477 CDD:176000 33/123 (27%)
C2B_Rabphilin_Doc2 499..631 CDD:176030 48/133 (36%)
Syt9NP_068689.2 Cysteine motif. /evidence=ECO:0000250|UniProtKB:O35681 9..31
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..147 7/29 (24%)
C2 221..345 CDD:472691 38/154 (25%)
C2B_Synaptotagmin-3-5-6-9-10 354..487 CDD:176048 49/134 (37%)
Blue background indicates that the domain is not in the aligned region.

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