DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rph and SYT13

DIOPT Version :10

Sequence 1:NP_572651.1 Gene:Rph / 32002 FlyBaseID:FBgn0030230 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_065877.1 Gene:SYT13 / 57586 HGNCID:14962 Length:426 Species:Homo sapiens


Alignment Length:203 Identity:55/203 - (27%)
Similarity:85/203 - (41%) Gaps:16/203 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   435 EELGNSLIYVALFDDDKYG-HDFLGAAKVCLSTVHSTSQYRISVPLGVEDQYSNAAEMAQNWPN- 497
            |||..:.:.:.|...|::. |...|..::.|...        |||||.. |:......|:. |: 
Human   232 EELPTATLTLTLRTCDRFSRHSVAGELRLGLDGT--------SVPLGAA-QWGELKTSAKE-PSA 286

  Fly   498 --GKMLLSLCYNTKRRALVVNVKQCINLMAMDNNG--SSDPFVKIQLKPDAHKNKKHKTSVKWRT 558
              |::|||:.|......|:|.:.:..||.:..:..  ..|..||:.||..|.|.||.:|......
Human   287 GAGEVLLSISYLPAANRLLVVLIKAKNLHSNQSKELLGKDVSVKVTLKHQARKLKKKQTKRAKHK 351

  Fly   559 LNPIYNEEFYFEASPHDLNKEMLILTVWDKDLGKSNDFLGSLQLGAQSKGERLQQWLDCIRLPDH 623
            :||::||...||.....|....:.|.|..:|....:..||...||..:.|.....|.:.::.|..
Human   352 INPVWNEMIMFELPDDLLQASSVELEVLGQDDSGQSCALGHCSLGLHTSGSERSHWEEMLKNPRR 416

  Fly   624 FHEKWHCL 631
            ....||.|
Human   417 QIAMWHQL 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RphNP_572651.1 FYVE_like_SF 84..172 CDD:333710
C2A_Rabphilin_Doc2 354..477 CDD:176000 8/42 (19%)
C2B_Rabphilin_Doc2 499..631 CDD:176030 37/133 (28%)
SYT13NP_065877.1 C2A_Synaptotagmin-13 160..277 CDD:176059 14/53 (26%)
C2B_Synaptotagmin-13 288..425 CDD:176052 39/137 (28%)
Blue background indicates that the domain is not in the aligned region.

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