DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rph and syt10

DIOPT Version :10

Sequence 1:NP_572651.1 Gene:Rph / 32002 FlyBaseID:FBgn0030230 Length:638 Species:Drosophila melanogaster
Sequence 2:XP_017210538.3 Gene:syt10 / 564226 ZFINID:ZDB-GENE-041210-297 Length:566 Species:Danio rerio


Alignment Length:493 Identity:125/493 - (25%)
Similarity:205/493 - (41%) Gaps:96/493 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 ATPIPNPGPGSMA--GDTRAVQSCHATPTRPARVKKLTIRVNDSSSSSSGHSEPED------EVD 224
            |.|.|.|...|::  .:.:||   .....:|::::               |.:.||      ||.
Zfish   116 APPAPPPVSRSVSPYAEAKAV---GVAGRQPSQIQ---------------HEDEEDKKWKVPEVK 162

  Fly   225 TGVGIGVGVVGGGMAKGIASTRLQREDSFRLRAYGSIRSFIDGGERKLSNSFFFNRQQSQRPSEC 289
            ......|.::...|.....|..:..|....||             .:||......||.::..|. 
Zfish   163 VNGRSSVKILEAAMKISQTSPDIPAEVQQALR-------------DRLSKQAKIQRQTTEPTSS- 213

  Fly   290 PEYDSVSMSKLRRESSFLRR-------GSVSSSWSISDSSGSGSNNSGNSQTQSQYQQHQQQLQQ 347
                       .|.:||.|.       .||..:........|.:.:.|..:.: .|:|.....::
Zfish   214 -----------SRHNSFRRHLPRQMNVTSVDFTMDTLPVRQSSAVSIGRIKPE-LYKQKSVDSEE 266

  Fly   348 HCRDPL--LGWLEIAISYREAFHSLDCTMVRARDLPAMDAAGLADPYCKLNIITPEAHTKYTRWQ 410
            ..::|:  .|.|..|:||.....:|...:::|.||||.|..|.:|||.|:.:: ||...|:    
Zfish   267 GTKEPVETCGKLSFALSYDYEEQALVVRILKALDLPAKDFTGTSDPYVKIYLL-PERKKKF---- 326

  Fly   411 RTKTVHKTRNPEFNETLQFVGVEPEELGNSLIYVALFDDDKY-GHDFLGAAKVCLSTVHSTSQYR 474
            :|:...||.||.|:|..:| .||..||.|..::.:::|.|:: .||.:|  :|.:..:.      
Zfish   327 QTRVHRKTLNPTFDEDFRF-PVEYSELCNRKLHFSVYDFDRFTSHDMIG--EVVVDNLF------ 382

  Fly   475 ISVPLGVEDQYSNAAEMAQNWPN-----------GKMLLSLCYNTKRRALVVNVKQCINLMAMDN 528
                     :.|:.:..|..|.:           |:::.||||......:.:.|.:|.||.|||.
Zfish   383 ---------ELSDLSREAVVWKDILAATTESVDLGEIMYSLCYLPTAGRMTLTVIKCRNLKAMDI 438

  Fly   529 NGSSDPFVKIQLKPDAHKNKKHKTSVKWRTLNPIYNEEFYFEASPHDLNKEMLILTVWDKDLGKS 593
            .|.|||:||:.|..|..:.||.||:.|..||||:|||...|:..|.::.:..|.:||.|.|....
Zfish   439 TGYSDPYVKVALICDGRRLKKRKTTTKKNTLNPVYNEAIIFDIPPENVEQVSLSITVMDYDRVGH 503

  Fly   594 NDFLGSLQLGAQSKGERLQQWLDCIRLPDHFHEKWHCL 631
            |:.:|..:.|..::|.....|.:.:..|......||.|
Zfish   504 NEVIGVCRAGPDAEGLGRDHWNEMLAYPRKPITHWHAL 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RphNP_572651.1 FYVE_like_SF 84..172 CDD:333710 2/3 (67%)
C2A_Rabphilin_Doc2 354..477 CDD:176000 39/123 (32%)
C2B_Rabphilin_Doc2 499..631 CDD:176030 46/131 (35%)
syt10XP_017210538.3 C2A_Synaptotagmin-1-5-6-9-10 274..399 CDD:176031 42/147 (29%)
C2B_Synaptotagmin-3-5-6-9-10 408..541 CDD:176048 47/132 (36%)

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