DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rph and Syt10

DIOPT Version :10

Sequence 1:NP_572651.1 Gene:Rph / 32002 FlyBaseID:FBgn0030230 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_061273.1 Gene:Syt10 / 54526 MGIID:1859546 Length:523 Species:Mus musculus


Alignment Length:377 Identity:103/377 - (27%)
Similarity:177/377 - (46%) Gaps:62/377 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   280 RQQSQRPSECPEYDSVSMSKLRRESSFLRRGSVSSSWSISDSSGS------GSNNSGNSQTQSQ- 337
            ::|:..|:....::|     .||.  ..|:.:||   |:..|.|:      |...:...:.:.: 
Mouse   159 QRQTTEPTSSSRHNS-----FRRH--LPRQMNVS---SVDFSVGTEPILQRGETRTSIGRIKPEL 213

  Fly   338 YQQHQQQLQQHCRDPL--LGWLEIAISYREAFHSLDCTMVRARDLPAMDAAGLADPYCKLNIITP 400
            |:|.....:.:.:|.:  .|.|..|:.|......|...:::|.||||.|..|.:|||.|:.:: |
Mouse   214 YKQKSVDSEGNRKDDVKTCGKLNFALQYDYENELLVVKIIKALDLPAKDFTGTSDPYVKIYLL-P 277

  Fly   401 EAHTKYTRWQRTKTVHKTRNPEFNETLQFVGVEPEELGNSLIYVALFDDDKYG-HDFLGAAKVCL 464
            :...|:    :|:...||.||.|:|..|| .|..::|.|..::.:::|.|::. ||.:|  :|.|
Mouse   278 DRKKKF----QTRVHRKTLNPLFDELFQF-PVVYDQLSNRKLHFSIYDFDRFSRHDMIG--EVIL 335

  Fly   465 STVHSTSQYRISVPLGVEDQYSNAAEMAQNWPN-----------GKMLLSLCYNTKRRALVVNVK 518
            ..:.               :.|:.:..|..|.:           |:::.||||......:.:.|.
Mouse   336 DNLF---------------EVSDLSREATVWKDIHCATTESIDLGEIMFSLCYLPTAGRMTLTVI 385

  Fly   519 QCINLMAMDNNGSSDPFVKIQLKPDAHKNKKHKTSVKWRTLNPIYNEEFYFEASPHDLNKEMLIL 583
            :|.||.|||..|||||:||:.|..:..:.||.||:.|..||||:|||...|:..|.::::..|.:
Mouse   386 KCRNLKAMDITGSSDPYVKVSLMCEGRRLKKRKTTTKKNTLNPVYNEAIIFDIPPENVDQVSLCI 450

  Fly   584 TVWDKDLGKSNDFLGSLQLGAQSKGERLQQWLDCIRLPDHFHEK----WHCL 631
            .|.|.|....|:.:|..:.|..::|.....|.:.:.    :|.|    ||.|
Mouse   451 AVMDYDRVGHNEVIGVCRTGLDAEGLGRDHWNEMLA----YHRKPITHWHPL 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RphNP_572651.1 FYVE_like_SF 84..172 CDD:333710
C2A_Rabphilin_Doc2 354..477 CDD:176000 37/123 (30%)
C2B_Rabphilin_Doc2 499..631 CDD:176030 46/135 (34%)
Syt10NP_061273.1 Cysteine motif. /evidence=ECO:0000250|UniProtKB:O35681 13..35
C2A_Synaptotagmin-1-5-6-9-10 231..356 CDD:176031 40/147 (27%)
C2B_Synaptotagmin-3-5-6-9-10 365..498 CDD:176048 47/136 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.