DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rph and Syt5

DIOPT Version :10

Sequence 1:NP_572651.1 Gene:Rph / 32002 FlyBaseID:FBgn0030230 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_001347350.1 Gene:Syt5 / 53420 MGIID:1926368 Length:386 Species:Mus musculus


Alignment Length:390 Identity:109/390 - (27%)
Similarity:169/390 - (43%) Gaps:82/390 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   303 ESSFLRRGSVSSSWSISD-SSGSG--------------SNNSGNSQTQSQYQQHQQQLQQHCRDP 352
            :||.:|:|:| .:|.::. ..|||              .......::|:|.|.|.|::::..|..
Mouse    18 DSSRIRQGAV-PAWVLATIVLGSGLLVFSSCFCLYRKRCRRRMGKKSQAQAQVHLQEVKELGRSY 81

  Fly   353 L--------------------------LGWLEIAISYREAFHSLDCTMVRARDLPAMDAAGLADP 391
            :                          ||.|:.::.|......|...:::|:.|.|:|..|.:||
Mouse    82 IDKVQPEIEELDRSPSMPGQQVSDKHQLGRLQYSLDYDFQTGQLLVGILQAQGLAALDLGGSSDP 146

  Fly   392 YCKLNIITPEAHTKYTRWQRTKTVHKTRNPEFNETLQFVGVEPEELGNSLIYVALFDDDKYG-HD 455
            |..:.:: |:...::    .||...:|.||.|.||..| .|...|||..::.:|::|.|::. :|
Mouse   147 YVSVYLL-PDKRRRH----ETKVHRQTLNPHFGETFAF-KVPYVELGGRVLVMAVYDFDRFSRND 205

  Fly   456 FLGAAKVCLSTVHSTSQYRISVPLGVEDQYSNAAEMAQNWPN------------GKMLLSLCYNT 508
            .:|..:|.:|:|                   |.....|.|..            |.:..||.|..
Mouse   206 AIGEVRVPMSSV-------------------NLGRPVQAWRELQVAPKEEQEKLGDICFSLRYVP 251

  Fly   509 KRRALVVNVKQCINLMAMDNNGSSDPFVKIQLKPDAHKNKKHKTSVKWRTLNPIYNEEFYFEASP 573
            ....|.|.|.:..||..||..|.|||:||:.|.....|.:|.||::|..||||.|||.|.||...
Mouse   252 TAGKLTVIVLEAKNLKKMDVGGLSDPYVKVHLLQGGKKVRKKKTTIKKNTLNPYYNEAFSFEVPC 316

  Fly   574 HDLNKEMLILTVWDKD-LGKSNDFLGSLQLGAQSKGERLQQWLDCIRLPDHFHEKWHCLAPDNPA 637
            ..:.|..:.|||.|.| ||| |:.:|.:.:||...|..|:.|.|.:..|.....:||.|.|.:.|
Mouse   317 DQVQKVQVELTVLDYDKLGK-NEAIGRVAVGAAVGGAGLRHWADMLANPRRPIAQWHSLRPPDRA 380

  Fly   638  637
            Mouse   381  380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RphNP_572651.1 FYVE_like_SF 84..172 CDD:333710
C2A_Rabphilin_Doc2 354..477 CDD:176000 35/123 (28%)
C2B_Rabphilin_Doc2 499..631 CDD:176030 52/132 (39%)
Syt5NP_001347350.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21 1/2 (50%)
Syt1_2_N 6..76 CDD:425364 14/58 (24%)
C2 108..230 CDD:472691 38/146 (26%)
C2 240..374 CDD:472691 53/134 (40%)
Blue background indicates that the domain is not in the aligned region.

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