DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rph and Pkc53E

DIOPT Version :10

Sequence 1:NP_572651.1 Gene:Rph / 32002 FlyBaseID:FBgn0030230 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_725626.1 Gene:Pkc53E / 48311 FlyBaseID:FBgn0003091 Length:679 Species:Drosophila melanogaster


Alignment Length:327 Identity:78/327 - (23%)
Similarity:118/327 - (36%) Gaps:98/327 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   325 GSNNSGNSQTQS--------------------------QYQQH--------QQQLQQHCRDPLLG 355
            ||:|:|:.|.|.                          ..:.|        |.....||:|.:.|
  Fly     4 GSDNNGDPQQQGAEGEAVGENKMKSRLRKGALKKKNVFNVKDHCFIARFFKQPTFCSHCKDFICG 68

  Fly   356 ------WLEIAISYREAFHSLDCTMV---RARD-----LPAMDAAGLADPYCKLNIITPEAHTKY 406
                  |:...   ::.|....|:.|   |..:     .|..|....:|        :|      
  Fly    69 YQSGYAWMGFG---KQGFQCQVCSYVVHKRCHEYVTFICPGKDKGIDSD--------SP------ 116

  Fly   407 TRWQRTKTVHKTRNPEFNETLQFVGVEPEELGNSLIYVALFDDDKYGHDFLGAAKVCLSTVHSTS 471
                  ||.|..      |...:.|....:...||:| .::      |..| ....|...||:..
  Fly   117 ------KTQHNF------EPFTYAGPTFCDHCGSLLY-GIY------HQGL-KCSACDMNVHARC 161

  Fly   472 QYRISVPLGVEDQYSNAAEMAQNWPNGKMLLSLCYNTKRRALVVNVKQCINLMAMDNNGSSDPFV 536
            :..:....|.:          .....|::.|.:  |.|...|.|.:|:..||:.||.||.|||:|
  Fly   162 KENVPSLCGCD----------HTERRGRIYLEI--NVKENLLTVQIKEGRNLIPMDPNGLSDPYV 214

  Fly   537 KIQLKPDAHKNKKHKTSVKWRTLNPIYNEEFYFEASPHDLNKEMLILTVWDKDLGKSNDFLGSLQ 601
            |::|.||.....|.||......|||::||...::..|.|.::.:|| .|||.|....|||:|:|.
  Fly   215 KVKLIPDDKDQSKKKTRTIKACLNPVWNETLTYDLKPEDKDRRILI-EVWDWDRTSRNDFMGALS 278

  Fly   602 LG 603
            .|
  Fly   279 FG 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RphNP_572651.1 FYVE_like_SF 84..172 CDD:333710
C2A_Rabphilin_Doc2 354..477 CDD:176000 23/136 (17%)
C2B_Rabphilin_Doc2 499..631 CDD:176030 42/105 (40%)
Pkc53ENP_725626.1 C1_cPKC_rpt1 44..110 CDD:410383 13/68 (19%)
C1_cPKC_rpt2 120..173 CDD:410386 12/76 (16%)
C2_PKC_alpha_gamma 177..307 CDD:175992 43/107 (40%)
STKc_cPKC 353..672 CDD:270739
Blue background indicates that the domain is not in the aligned region.

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